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qh_6_scaffold_534

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_534_trna_1
unknown

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comp(79..149)
DNA (71bp)
transferRNA
qh_6_scaffold_534_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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391..1290
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPA0_NATM8
hypothetical protein
DUF171 family protein {ECO:0000313|EMBL:CCQ35807.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (st
qh_6_scaffold_534_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1298..2305
DNA (1008bp) protein (336aa)
50S ribosomal protein L3 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL3_NATPD
rpl3p; 50S ribosomal protein L3P
50S ribosomal protein L3 {ECO:0000255|HAMAP-Rule:MF_01325}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
qh_6_scaffold_534_3
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2305..3051
DNA (747bp) protein (249aa)
LSU ribosomal protein l4p; K02930 large subunit ribosomal protein L4e id=24614548 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus H
rpl4lp; 50S ribosomal protein L4P
qh_6_scaffold_534_4
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3048..3296
DNA (249bp) protein (83aa)
50S ribosomal protein L23P n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BDP1_9EURY
50S ribosomal protein L23P {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56
50S ribosomal protein L23
qh_6_scaffold_534_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3298..4032
DNA (735bp) protein (245aa)
50S ribosomal protein L2 n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LL38_HALJP
rpl2p; 50S ribosomal protein L2P
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;"
qh_6_scaffold_534_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4025..4447
DNA (423bp) protein (141aa)
30S ribosomal protein S19 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RS19_NATPD
rps19p; 30S ribosomal protein S19P
30S ribosomal protein S19 {ECO:0000255|HAMAP-Rule:MF_00531}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
qh_6_scaffold_534_7
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4447..4908
DNA (462bp) protein (154aa)
50S ribosomal protein L22P n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MQL2_9EURY
50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" s
qh_6_scaffold_534_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4908..5849
DNA (942bp) protein (314aa)
30S ribosomal protein S3 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKJ1_9EURY
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
rps3; 30S ribosomal protein S3
qh_6_scaffold_534_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5849..6070
DNA (222bp) protein (74aa)
50S ribosomal protein L29P n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZU9_9EURY
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucih
50S ribosomal protein L29
qh_6_scaffold_534_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6073..6402
DNA (330bp) protein (110aa)
rnp1; ribonuclease P protein component 1 (EC:3.1.26.5)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00754};; Rpp29 {ECO:0000256|H
Ribonuclease P protein component 1 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP54_NATM8
qh_6_scaffold_534_11

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6393..6743
DNA (351bp) protein (117aa)
30S ribosomal protein S17P n=1 Tax=halophilic archaeon DL31 RepID=G2MM79_9ARCH
30S ribosomal protein S17
Ribosomal protein S17P {ECO:0000313|EMBL:AEN06126.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qh_6_scaffold_534_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6743..7141
DNA (399bp) protein (133aa)
50S ribosomal protein L14 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL14_NATPD
rpl14p; 50S ribosomal protein L14P
50S ribosomal protein L14 {ECO:0000255|HAMAP-Rule:MF_01367}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
qh_6_scaffold_534_13
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7138..7494
DNA (357bp) protein (119aa)
50S ribosomal protein L24P n=3 Tax=Haloarcula RepID=RL24_HALMA
rpl24p; 50S ribosomal protein L24
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensi
qh_6_scaffold_534_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7491..8192
DNA (702bp) protein (234aa)
30S ribosomal protein S4e n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RS4E_NATPD
rps4R; 30S ribosomal protein S4e
30S ribosomal protein S4e {ECO:0000255|HAMAP-Rule:MF_00485}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
qh_6_scaffold_534_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


8189..8716
DNA (528bp) protein (176aa)
50S ribosomal protein L5 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL5_NATPD
rpl5p; 50S ribosomal protein L5P
50S ribosomal protein L5 {ECO:0000255|HAMAP-Rule:MF_01333}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
qh_6_scaffold_534_16
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8713..8868
DNA (156bp) protein (52aa)
30S ribosomal protein S14 type Z n=1 Tax=Halobacterium sp. DL1 RepID=G4IGK8_9EURY
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacteriu
rps14P; 30S ribosomal protein S14
qh_6_scaffold_534_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


8871..9263
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RS8_NATPD
rps8p; 30S ribosomal protein S8P
30S ribosomal protein S8 {ECO:0000255|HAMAP-Rule:MF_01302}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
qh_6_scaffold_534_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9253..9423
DNA (171bp) protein (57aa)
50S ribosomal protein L6 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL6_NATPD
rpl6p; 50S ribosomal protein L6P
50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
Displaying 19 items

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