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qh_6_scaffold_498

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_498_1
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(150..518)
DNA (369bp) protein (123aa)
Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKQ0_SINAD
branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
qh_6_scaffold_498_2
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(1031..1321)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R5L3_ISOPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV61762.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Iso
qh_6_scaffold_498_3
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1315..1674)
DNA (360bp) protein (120aa)
Uncharacterized protein id=2598347 bin=GWF1_Xanthomonadales_69_6 species=Rubrivivax gelatinosus genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:KFL36692.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae
hypothetical protein
qh_6_scaffold_498_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1821..2648)
DNA (828bp) protein (276aa)
Deoxyribodipyrimidine photo-lyase {ECO:0000313|EMBL:CBH24286.1}; EC=4.1.99.3 {ECO:0000313|EMBL:CBH24286.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhod
Deoxyribodipyrimidine photo-lyase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8D1_SALRM
phrB; deoxyribodipyrimidine photo-lyase
qh_6_scaffold_498_trna_1
unknown

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3412..3484
DNA (73bp)
transferRNA
qh_6_scaffold_498_5
unknown

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3578..3709
DNA (132bp) protein (44aa)

This feature has no annotations

qh_6_scaffold_498_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(4303..7434)
DNA (3132bp) protein (1044aa)
acriflavine resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=24659126 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
acriflavine resistance protein
Acriflavine resistance protein (Cation efflux system) {ECO:0000313|EMBL:ABC45263.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacte
qh_6_scaffold_498_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(7474..9027)
DNA (1554bp) protein (518aa)
mdtA; multidrug transporter mdtA id=24659127 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
mdtA; multidrug transporter mdtA
Multidrug transporter mdtA {ECO:0000313|EMBL:CBH24289.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
qh_6_scaffold_498_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9251..9703)
DNA (453bp) protein (151aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00
Ribonuclease H n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3C1_SALRD
rnhA; RNase H
qh_6_scaffold_498_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9882..10904
DNA (1023bp) protein (341aa)
GTPase Obg n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8D7_SALRM
GTP-binding protein, GTP1/Obg family
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
qh_6_scaffold_498_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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10901..12061
DNA (1161bp) protein (387aa)
DNA processing protein DprA n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3B9_SALRD
dprA; DNA processing protein DprA
DNA processing protein DprA {ECO:0000313|EMBL:ABC43675.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qh_6_scaffold_498_11
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12256..13323
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CG86_METED
Uncharacterized protein {ECO:0000313|EMBL:CEA04103.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1
hypothetical protein
qh_6_scaffold_498_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13526..14668
DNA (1143bp) protein (381aa)
Cysteine desulfurase {ECO:0000313|EMBL:CBH24294.1}; EC=2.8.1.7 {ECO:0000313|EMBL:CBH24294.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; S
Cysteine desulfurase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8D9_SALRM
sufS; cysteine desulfurase
qh_6_scaffold_498_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14796..15179
DNA (384bp) protein (128aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028, ECO:0000313|EMBL:CBH24296.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II
Pseudouridine synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8E1_SALRM
rluD; ribosomal large subunit pseudouridine synthase D
Displaying 14 items

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