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qh_6_scaffold_1661

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_1661_1
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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218..652
DNA (435bp) protein (145aa)
hypothetical protein id=24657760 bin=Salinibacter_ruber species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX03667.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantia
qh_6_scaffold_1661_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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860..1912
DNA (1053bp) protein (351aa)
Tetratricopeptide repeat family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S464_SALRD
hypothetical protein
Tetratricopeptide repeat family {ECO:0000313|EMBL:ABC44172.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
qh_6_scaffold_1661_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1872..2393
DNA (522bp) protein (174aa)
hypothetical protein id=24657759 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Tetratricopeptide repeat family {ECO:0000313|EMBL:ABC44172.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
qh_6_scaffold_1661_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2549..3319)
DNA (771bp) protein (257aa)
rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase; K00556 tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] id=24657758 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
23S rRNA (Guanosine-2'-O-)-methyltransferase {ECO:0000313|EMBL:CBH23987.1}; EC=2.1.1.- {ECO:0000313|EMBL:CBH23987.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase
qh_6_scaffold_1661_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3482..3730
DNA (249bp) protein (83aa)
hypothetical protein
hypothetical protein id=24657757 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23986.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_6_scaffold_1661_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3775..4497
DNA (723bp) protein (241aa)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7I0_SALRM
short-chain alcohol dehydrogenase
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:CBH23985.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
qh_6_scaffold_1661_7
unknown

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comp(4557..4973)
DNA (417bp) protein (139aa)

This feature has no annotations

qh_6_scaffold_1661_8
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

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5109..5783
DNA (675bp) protein (225aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKK7_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Caldithrix_48_16_curated
ECF subfamily RNA polymerase sigma-24 subunit
qh_6_scaffold_1661_9
unknown

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5780..6232
DNA (453bp) protein (151aa)

This feature has no annotations

qh_6_scaffold_1661_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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6846..7553
DNA (708bp) protein (236aa)
Extracellular solute-binding protein, family 7 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7H9_SALRM
extracellular solute-binding protein
Extracellular solute-binding protein, family 7 {ECO:0000313|EMBL:CBH23984.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" so
qh_6_scaffold_1661_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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7687..8346
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S469_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45243.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_6_scaffold_1661_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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8529..9386
DNA (858bp) protein (286aa)
punA; Purine nucleoside phosphorylase 1; K03783 purine-nucleoside phosphorylase [EC:2.4.2.1] id=24658073 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477, ECO:0000313|EMBL:CBH25276.1};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR00047
punA; Purine nucleoside phosphorylase 1
qh_6_scaffold_1661_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(10072..10575)
DNA (504bp) protein (168aa)
CoA-binding domain protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJR4_RHOMR
CoA-binding domain-containing protein
CoA-binding domain protein {ECO:0000313|EMBL:AEN74232.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus m
qh_6_scaffold_1661_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10572..11762)
DNA (1191bp) protein (397aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase {ECO:0000313|EMBL:ACY49218.1}; EC=2.5.1.49 {ECO:0000313|EMBL:ACY49218.1};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
O-acetylhomoserine/O-acetylserine sulfhydrylase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MEJ0_RHOM4
O-acetylhomoserine/O-acetylserine sulfhydrylase
Displaying 14 items

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