ggKbase home page

qh_6_scaffold_4509

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_4509_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(1..846)
DNA (846bp) protein (282aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:000025
Glycine--tRNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBS4_SALRM
glyQS; glycyl-tRNA synthetase
qh_6_scaffold_4509_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1147..1755)
DNA (609bp) protein (203aa)
UPF0758 protein SRU_2338 n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Y2338_SALRD
radC; DNA repair protein RadC
UPF0758 protein SRU_2338; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain DSM 13855 / M31).;"
qh_6_scaffold_4509_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2141..3262)
DNA (1122bp) protein (374aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884, ECO:0000313|EMBL:CBH25482.1}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:M
rho; transcription termination factor Rho
rho; transcription termination factor Rho; K03628 transcription termination factor Rho id=24658283 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qh_6_scaffold_4509_4
unknown

Not on your lists

comp(3494..3715)
DNA (222bp) protein (74aa)

This feature has no annotations

qh_6_scaffold_4509_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4023..4604
DNA (582bp) protein (194aa)
alpha/beta fold family hydrolase
alpha/beta fold family hydrolase id=24658284 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Hydrolase, alpha/beta fold family, putative {ECO:0000313|EMBL:ABC45261.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sourc
qh_6_scaffold_4509_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4668..6293
DNA (1626bp) protein (542aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136, ECO:0000313|EMBL:CBH25484.1}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136, ECO:0000313|EMBL:CBH25484.1};; TaxI
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBS9_SALRM
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
qh_6_scaffold_4509_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6387..6989
DNA (603bp) protein (201aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
Ribonuclease HII n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBV8_SALRM
rnhB; ribonuclease HII
qh_6_scaffold_4509_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7111..7452)
DNA (342bp) protein (114aa)
aroK; shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71] id=24657530 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Shikimate kinase {ECO:0000255|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000255|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000255|HAMAP-Rule:MF_00109};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroi
aroK; shikimate kinase
qh_6_scaffold_4509_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7585..8367
DNA (783bp) protein (261aa)
tRNA pseudouridine synthase A {ECO:0000255|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000255|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=TRUA_SALRD
truA; tRNA pseudouridine synthase A
qh_6_scaffold_4509_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8477..8662
DNA (186bp) protein (62aa)
Hypohtetical protein, membrane n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6V7_SALRM
hypothetical protein
Hypohtetical protein, membrane {ECO:0000313|EMBL:CBH23762.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
qh_6_scaffold_4509_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8892..9623
DNA (732bp) protein (244aa)
Arginine deiminase {ECO:0000256|SAAS:SAAS00092997}; EC=3.5.3.6 {ECO:0000256|SAAS:SAAS00092997};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Amidinotransferase superfamily n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4S7_SALRD
amidinotransferase
Displaying 11 items

View Taxonomy