ggKbase home page

qh_6_scaffold_7385

Search features with annotation key words

Displaying 10 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_7385_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2..262)
DNA (261bp) protein (87aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedi
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Salisaeta longa RepID=UPI0003B5382B
5-formyltetrahydrofolate cyclo-ligase
qh_6_scaffold_7385_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

485..883
DNA (399bp) protein (133aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis
alkylhydroperoxidase n=1 Tax=Salisaeta longa RepID=UPI0003B3487B
alkylhydroperoxidase
qh_6_scaffold_7385_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

911..1381
DNA (471bp) protein (157aa)
Signal recognition particle protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9P6_SALRM
Suspect SCG annotation. See neighboring gene [qh_6_scaffold_7385_4].
ffh; signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306, ECO:0000313|EMBL:CBH24751.1}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=761659 species="Bacteria; Bacteroidetes;
qh_6_scaffold_7385_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


1435..2229
DNA (795bp) protein (265aa)
Signal recognition particle protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S231_SALRD
ffh; signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306, ECO:0000313|EMBL:CBH24751.1}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=761659 species="Bacteria; Bacteroidetes;
qh_6_scaffold_7385_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


2267..2956
DNA (690bp) protein (230aa)
rpsP; 30S ribosomal protein S16
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 id=24659588 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385, ECO:0000313|EMBL:CBH24750.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qh_6_scaffold_7385_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2984..3493
DNA (510bp) protein (170aa)
rimM; 16S rRNA processing protein RimM
rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM id=24659587 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
qh_6_scaffold_7385_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3522..4208
DNA (687bp) protein (229aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00605}; EC=2.1.1.228 {ECO:0000255|HAMAP-Rule:MF_00605};; M1G-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltr
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=TRMD_SALRD
trmD; tRNA (guanine-N1)-methyltransferase
qh_6_scaffold_7385_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4716..5282
DNA (567bp) protein (189aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; TaxID=761659 species=
hypothetical protein
hypothetical protein id=24659584 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qh_6_scaffold_7385_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5236..5541
DNA (306bp) protein (102aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; TaxID=761659 species=
hypothetical protein
hypothetical protein id=24659584 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qh_6_scaffold_7385_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5602..5973
DNA (372bp) protein (124aa)
smpB; SsrA-binding protein
smpB; SsrA-binding protein; K03664 SsrA-binding protein id=24659583 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
Displaying 10 items

View Taxonomy