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qh_6_scaffold_1567

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_1567_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2..265)
DNA (264bp) protein (88aa)
radC; DNA repair protein RadC
radC; DNA repair protein RadC; K03630 DNA repair protein RadC id=24658282 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA repair protein RadC {ECO:0000313|EMBL:CBH25481.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_6_scaffold_1567_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(424..1545)
DNA (1122bp) protein (374aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884, ECO:0000313|EMBL:CBH25482.1}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:M
rho; transcription termination factor Rho
rho; transcription termination factor Rho; K03628 transcription termination factor Rho id=24658283 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qh_6_scaffold_1567_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2344..3027
DNA (684bp) protein (228aa)
alpha/beta fold family hydrolase
alpha/beta fold family hydrolase id=24658284 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Hydrolase, alpha/beta fold family, putative {ECO:0000313|EMBL:ABC45261.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sourc
qh_6_scaffold_1567_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3152..4783
DNA (1632bp) protein (544aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136, ECO:0000313|EMBL:CBH25484.1}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136, ECO:0000313|EMBL:CBH25484.1};; TaxI
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBS9_SALRM
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
qh_6_scaffold_1567_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4902..5096
DNA (195bp) protein (65aa)
rnhB; ribonuclease HII; K03470 ribonuclease HII [EC:3.1.26.4] id=24658315 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
rnhB; ribonuclease HII
Displaying 5 items

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