ggKbase home page

qh_7_scaffold_2218

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_2218_1
unknown

Not on your lists

comp(2..196)
DNA (195bp) protein (65aa)

This feature has no annotations

qh_7_scaffold_2218_2
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

307..687
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PK49_9EURY
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:CCQ33468.1}; Endoribonuclease L-PSP protein {ECO:0000313|EMBL:ERJ07582.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
qh_7_scaffold_2218_3
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

687..893
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LU67_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36986.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
qh_7_scaffold_2218_trna_1
unknown

Not on your lists

921..1002
DNA (82bp)
transferRNA
qh_7_scaffold_2218_4
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


1060..1539
DNA (480bp) protein (160aa)
RNA-binding protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LJ49_HALJP
RNA-binding protein
RNA-binding protein {ECO:0000313|EMBL:AJF25201.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qh_7_scaffold_2218_5
unknown

Not on your lists

1567..1821
DNA (255bp) protein (85aa)

This feature has no annotations

qh_7_scaffold_2218_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1882..2235
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZ64_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46750.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qh_7_scaffold_2218_7
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2355..2717)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JQU5_HALVA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ04682.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
qh_7_scaffold_2218_8
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2909..3475)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JQF6_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA11367.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qh_7_scaffold_2218_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3614..3907
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYD9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27643.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_7_scaffold_2218_10
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3964..4368
DNA (405bp) protein (135aa)
Nascent polypeptide-associated complex protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0HEI6_9EURY
Nascent polypeptide-associated complex protein {ECO:0000256|HAMAP-Rule:MF_00814, ECO:0000313|EMBL:ELZ82208.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacacea
nascent polypeptide associated complex nac
qh_7_scaffold_2218_11
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4371..5090
DNA (720bp) protein (240aa)
gcd14; tRNA (adenine-N1-)-methyltransferase (EC:2.1.1.36)
tRNA (Adenine-N1-)-methyltransferase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JES5_HALVA
tRNA (Adenine-N1-)-methyltransferase {ECO:0000313|EMBL:EMA07647.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vall
qh_7_scaffold_2218_12
unknown

Not on your lists

comp(5119..5235)
DNA (117bp) protein (39aa)

This feature has no annotations

qh_7_scaffold_2218_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5263..5928)
DNA (666bp) protein (222aa)
HAD-superfamily hydrolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D5A6_9EURY
HAD-superfamily hydrolase {ECO:0000313|EMBL:ELZ29354.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
HAD-superfamily hydrolase
qh_7_scaffold_2218_14
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6068..6349)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CM84_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24380.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
qh_7_scaffold_2218_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6612..7100
DNA (489bp) protein (163aa)
Lrp/AsnC family transcription regulator n=1 Tax=Halomicrobium katesii RepID=UPI000363F2D4
AsnC family transcriptional regulator
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:ACV46876.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="H
qh_7_scaffold_2218_16
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7194..7445)
DNA (252bp) protein (84aa)
Transposase {ECO:0000313|EMBL:CCQ34910.1}; Transposase protein {ECO:0000313|EMBL:ERJ05696.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdu
qh_7_scaffold_2218_17
unknown

Not on your lists

comp(7442..7648)
DNA (207bp) protein (69aa)

This feature has no annotations

qh_7_scaffold_2218_18
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7954..10542)
DNA (2589bp) protein (863aa)
DUF262/DUF1524/AAA-4 domain protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LNC0_HALWC
hypothetical protein
DUF262/DUF1524/AAA-4 domain protein {ECO:0000313|EMBL:CCC41926.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum wal
qh_7_scaffold_2218_19
unknown

Not on your lists

10727..11152
DNA (426bp) protein (142aa)

This feature has no annotations

qh_7_scaffold_2218_20
unknown

Not on your lists

11153..12295
DNA (1143bp) protein (381aa)

This feature has no annotations

Displaying 21 items

View Taxonomy