ggKbase home page

qh_7_scaffold_1578

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_1578_1
unknown

Not on your lists

comp(3..413)
DNA (411bp) protein (137aa)

This feature has no annotations

qh_7_scaffold_1578_2
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(410..1027)
DNA (618bp) protein (206aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKK7_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Caldithrix_48_16_curated
ECF subfamily RNA polymerase sigma-24 subunit
qh_7_scaffold_1578_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1628..2350)
DNA (723bp) protein (241aa)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7I0_SALRM
short-chain alcohol dehydrogenase
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:CBH23985.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
qh_7_scaffold_1578_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2872..3642
DNA (771bp) protein (257aa)
rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase; K00556 tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] id=24657758 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
23S rRNA (Guanosine-2'-O-)-methyltransferase {ECO:0000313|EMBL:CBH23987.1}; EC=2.1.1.- {ECO:0000313|EMBL:CBH23987.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase
qh_7_scaffold_1578_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3798..4439)
DNA (642bp) protein (214aa)
hypothetical protein
hypothetical protein id=24657759 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Tetratricopeptide repeat family {ECO:0000313|EMBL:ABC44172.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
qh_7_scaffold_1578_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4542..5426)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7I4_SALRM
hypothetical protein
Tetratricopeptide repeat family {ECO:0000313|EMBL:ABC44172.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
qh_7_scaffold_1578_7
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(5651..6145)
DNA (495bp) protein (165aa)
hypothetical protein id=24657760 bin=Salinibacter_ruber species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX03667.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantia
qh_7_scaffold_1578_8
unknown

Not on your lists

6337..6768
DNA (432bp) protein (144aa)

This feature has no annotations

qh_7_scaffold_1578_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6849..8195
DNA (1347bp) protein (449aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752, ECO:0000313|EMBL:CBH23990.1}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=761659 species="Bacteria; Bacteroidetes
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7I5_SALRM
sun; ribosomal RNA small subunit methyltransferase B
qh_7_scaffold_1578_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8251..9450
DNA (1200bp) protein (400aa)
hypothetical protein
hypothetical protein id=24657763 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23991.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_1578_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9660..10379
DNA (720bp) protein (240aa)
TonB family protein
TonB family protein; K03832 periplasmic protein TonB id=24657895 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
TonB family C-terminal domain protein {ECO:0000313|EMBL:ABC44721.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sal
qh_7_scaffold_1578_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10680..12557
DNA (1878bp) protein (626aa)
Pyruvate dehydrogenase beta subunit {ECO:0000313|EMBL:CBH25103.1}; EC=1.2.4.4 {ECO:0000313|EMBL:CBH25103.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
Pyruvate dehydrogenase beta subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAP8_SALRM
bkdA2; Pyruvate dehydrogenase beta subunit
Displaying 12 items

View Taxonomy