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qh_7_scaffold_380

Search features with annotation key words

Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_380_1
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(133..450)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LH99_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA31809.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
qh_7_scaffold_380_2
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

515..814
DNA (300bp) protein (100aa)
50S ribosomal protein L37Ae n=4 Tax=Natrinema RepID=I7CW03_NATSJ
Ribosomal L37ae protein
50S ribosomal protein L37Ae {ECO:0000256|HAMAP-Rule:MF_00327}; Ribosomal protein L43e {ECO:0000256|HAMAP-Rule:MF_00327}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natr
qh_7_scaffold_380_3
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

811..945
DNA (135bp) protein (45aa)
DNA-directed RNA polymerase subunit P {ECO:0000256|HAMAP-Rule:MF_00615}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00615};; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit P n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQA8_HALUD
DNA-directed RNA polymerase subunit P
qh_7_scaffold_380_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

967..1251
DNA (285bp) protein (95aa)
KEOPS complex subunit Pcc1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IME9_NATPD
rpo operon protein
KEOPS complex subunit Pcc1 {ECO:0000313|EMBL:CAI50709.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis
qh_7_scaffold_380_5
unknown

Not on your lists

1315..1479
DNA (165bp) protein (55aa)

This feature has no annotations

qh_7_scaffold_380_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1681..2739)
DNA (1059bp) protein (353aa)
multi-sensor signal transduction histidine kinase id=24647578 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Signal transduction histidine kinase {ECO:0000313|EMBL:ERH08715.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
multi-sensor signal transduction histidine kinase
qh_7_scaffold_380_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2887..4698)
DNA (1812bp) protein (604aa)
Glycosyltransferase AglD {ECO:0000313|EMBL:CAI49213.1}; EC=2.4.-.- {ECO:0000313|EMBL:CAI49213.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natron
Glycosyltransferase AglD n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRN0_NATPD
glycosyltransferase
qh_7_scaffold_380_8
unknown

Not on your lists

comp(4752..5543)
DNA (792bp) protein (264aa)

This feature has no annotations

qh_7_scaffold_380_9
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5627..6721
DNA (1095bp) protein (365aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halof
zim; CTAG modification methylase (EC:2.1.1.113)
CTAG modification methylase / site-specific DNA-methyltransferase (Cytosine-N4-specific) n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GQ45_9EURY
qh_7_scaffold_380_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6743..7417
DNA (675bp) protein (225aa)
aroD; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HA
3-dehydroquinate dehydratase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRN2_NATPD
qh_7_scaffold_380_11
unknown

Not on your lists

7543..7761
DNA (219bp) protein (73aa)

This feature has no annotations

qh_7_scaffold_380_12
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7858..8235
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NTN9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA60594.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
hypothetical protein
qh_7_scaffold_380_13
unknown

Not on your lists

comp(8372..8578)
DNA (207bp) protein (69aa)

This feature has no annotations

qh_7_scaffold_380_14
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8974..9348
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3AND4_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:GAD59224.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas a
NhaP-type Na+(K+)/H+ antiporter
qh_7_scaffold_380_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9405..10535)
DNA (1131bp) protein (377aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase {ECO:0000255|HAMAP-Rule:MF_01244}; Short=DHQ synthase {ECO:0000255|HAMAP-Rule:MF_01244};; EC=1.4.1.24 {ECO:0000255|HAMAP-Rule:MF_01244};; 3-dehydroquinate synthase II {ECO:00
3-dehydroquinate synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=DHQS_NATPD
qh_7_scaffold_380_16
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10812..11120)
DNA (309bp) protein (103aa)
Regulatory protein ArsR n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2N0_9EURY
ArsR family transcriptional regulator {ECO:0000313|EMBL:AKH97453.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halana
regulatory protein ArsR
qh_7_scaffold_380_17

Not on your lists

comp(13165..14430)
DNA (1266bp) protein (422aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y8C7_9ARCH
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:ESS11178.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
inner-membrane translocator
qh_7_scaffold_380_18

Not on your lists

comp(14459..15802)
DNA (1344bp) protein (448aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=uncultured archaeon A07HR60 RepID=V4YIM2_9ARCH
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:ESS11177.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;
extracellular ligand-binding receptor
qh_7_scaffold_380_19

Not on your lists

15877..16839
DNA (963bp) protein (321aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein id=24635988 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:ESS11176.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
inner-membrane translocator
qh_7_scaffold_380_20

Not on your lists

16843..17622
DNA (780bp) protein (260aa)
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein id=24635987 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ESS11175.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
ABC transporter
qh_7_scaffold_380_21

Not on your lists

17619..18344
DNA (726bp) protein (242aa)
ABC-type branched-chain amino acid transport system, ATPase component n=2 Tax=Archaea RepID=U1P191_9EURY
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ESS11174.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
ABC transporter
qh_7_scaffold_380_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18739..21003
DNA (2265bp) protein (755aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMC7_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50732.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qh_7_scaffold_380_23
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21145..21684
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JCT1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN56886.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qh_7_scaffold_380_24
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21789..22184
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3ESI8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN56887.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qh_7_scaffold_380_25
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22259..23083)
DNA (825bp) protein (275aa)
fba_2; fructose-bisphosphate aldolase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase {ECO:0000313|EMBL:CCQ35407.1}; EC=2.2.1.10 {ECO:0000313|EMBL:CCQ35407.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteri
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQC5_NATPD
qh_7_scaffold_380_26
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23080..25176)
DNA (2097bp) protein (699aa)
trpB1; tryptophan synthase beta subunit (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
Tryptophan synthase beta chain n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XND1_NATM8
qh_7_scaffold_380_27
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25166..25870)
DNA (705bp) protein (235aa)
trpC; indole-3-glycerol-phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134};; TaxID=268739 species="Archaea; Eu
Indole-3-glycerol phosphate synthase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XZ31_NATM8
qh_7_scaffold_380_28
unknown

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26047..26229
DNA (183bp) protein (61aa)

This feature has no annotations

qh_7_scaffold_380_29
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26236..27648)
DNA (1413bp) protein (471aa)
MmgE/PrpD family protein n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T041_MICAI
Uncharacterized protein {ECO:0000313|EMBL:KGY28801.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxy
MmgE/PrpD family protein
qh_7_scaffold_380_30
unknown

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comp(27645..28265)
DNA (621bp) protein (207aa)

This feature has no annotations

Displaying items 1-30 of 32 in total

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