ggKbase home page

qh_7_scaffold_430

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_430_1
unknown

Not on your lists

3..95
DNA (93bp) protein (31aa)

This feature has no annotations

qh_7_scaffold_430_2
RLO_PLX_64_10, Bacteria

Not on your lists

92..469
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Microcystis aeruginosa PCC 9808 RepID=I4HKJ7_MICAE
putative aspartyl protease Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
qh_7_scaffold_430_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

547..858
DNA (312bp) protein (104aa)
hypothetical protein id=24657039 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23681.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_430_4
unknown

Not on your lists

855..992
DNA (138bp) protein (46aa)

This feature has no annotations

qh_7_scaffold_430_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1262..2419)
DNA (1158bp) protein (386aa)
GTP-binding protein YchF n=1 Tax=Salisaeta longa RepID=UPI0003B37CE0
GTP-binding protein YchF
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothe
qh_7_scaffold_430_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2614..3126
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MK24_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY46937.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qh_7_scaffold_430_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3194..3907)
DNA (714bp) protein (238aa)
metallophosphoesterase n=1 Tax=Salisaeta longa RepID=UPI0003B6BD3A
serine/threonine protein phosphatase
Serine/threonine protein phosphatase {ECO:0000313|EMBL:ABC44373.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qh_7_scaffold_430_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4114..4608)
DNA (495bp) protein (165aa)
N utilization substance protein B homolog n=2 Tax=Rhodothermus marinus RepID=D0MK26_RHOM4
NusB antitermination factor
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=762570 species="Bacteria; Bacte
qh_7_scaffold_430_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5192..6829
DNA (1638bp) protein (546aa)
DNA internalization-related competence protein ComEC/Rec2 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4I1_SALRM
ComEC; DNA internalization-related competence protein ComEC/Rec2
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:CBH22936.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
qh_7_scaffold_430_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7100..7960)
DNA (861bp) protein (287aa)
UspA domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MK28_RHOM4
UspA domain-containing protein
UspA domain protein {ECO:0000313|EMBL:ACY46941.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus
qh_7_scaffold_430_11
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8472..8903
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AP02_DESPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAG35922.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfotalea ps
qh_7_scaffold_430_12
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

8940..9968
DNA (1029bp) protein (343aa)
Ca2+/Na+ antiporter n=1 Tax=Rivularia sp. PCC 7116 RepID=K9RHB1_9CYAN
Ca2+/Na+ antiporter
Ca2+/Na+ antiporter {ECO:0000313|EMBL:AFY56719.1}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
qh_7_scaffold_430_13
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(10056..10556)
DNA (501bp) protein (167aa)
ppiA; peptidyl-prolyl cis-trans isomerase A (EC:5.2.1.8); K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] id=14430423 bin=bin3_NC10 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
ppiA; peptidyl-prolyl cis-trans isomerase A (EC:5.2.1.8); K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] Tax=CSP1_5_NC10
cyclophilin type peptidyl-prolyl cis-trans isomerase
qh_7_scaffold_430_14
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10763..12898)
DNA (2136bp) protein (712aa)
DNA mismatch repair protein MutS domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDP5_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:ETX07425.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
putative DNA mismatch repair protein, MutS family
qh_7_scaffold_430_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13017..13883)
DNA (867bp) protein (289aa)
TatD family hydrolase n=1 Tax=Salisaeta longa RepID=UPI0003B450F3
TatD family hydrolase
Hydrolase, TatD family {ECO:0000313|EMBL:ACY49063.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marin
qh_7_scaffold_430_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14104..16464
DNA (2361bp) protein (787aa)
Putative signal transduction histidine kinase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHA8_RHOMR
putative signal transduction histidine kinase
Signal transduction histidine kinase, LytS {ECO:0000313|EMBL:ACY49064.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rho
qh_7_scaffold_430_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16436..16786
DNA (351bp) protein (117aa)
Putative signal transduction histidine kinase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHA8_RHOMR
putative signal transduction histidine kinase
Signal transduction histidine kinase, LytS {ECO:0000313|EMBL:ACY49064.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rho
qh_7_scaffold_430_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16877..17755
DNA (879bp) protein (293aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDS1_RHOM4
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ACY49065.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermu
qh_7_scaffold_430_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17850..19259
DNA (1410bp) protein (470aa)
spoIID; Stage II sporulation protein D; K06381 stage II sporulation protein D id=24659245 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
spoIID; sporulation protein SpoIID
Sporulation protein SpoIID {ECO:0000313|EMBL:ABC43751.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
qh_7_scaffold_430_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19385..20269
DNA (885bp) protein (295aa)
SUA5 protein
SUA5 protein {ECO:0000313|EMBL:CBH24718.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M
SUA5 protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein id=24659553 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qh_7_scaffold_430_21
Porphyromonas endodontalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20253..21239
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JC54_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEN82248.1}; TaxID=553175 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas endodontali
qh_7_scaffold_430_22
unknown

Not on your lists

21315..21800
DNA (486bp) protein (162aa)

This feature has no annotations

qh_7_scaffold_430_23
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

comp(22257..23420)
DNA (1164bp) protein (388aa)
Sugar-binding domain protein id=4827571 bin=GWA2_Ignavibacteriae_55_25 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Ignavibacteriae_55_25 organism_group=Ignavibacteria
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator Tax=RBG_13_Caldithrix_44_9_curated
LacI family transcriptional regulator
qh_7_scaffold_430_24
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24091..27222
DNA (3132bp) protein (1044aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036F5F9D
Uncharacterized protein {ECO:0000313|EMBL:KEO73479.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
TonB-dependent outer membrane protein, SusC/RagA
qh_7_scaffold_430_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

27427..29058
DNA (1632bp) protein (544aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00038019CD
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AHG88728.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
qh_7_scaffold_430_26
unknown

Not on your lists

29210..29530
DNA (321bp) protein (107aa)

This feature has no annotations

qh_7_scaffold_430_27
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

29639..31012
DNA (1374bp) protein (458aa)
Fibronectin type III domain protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NNK3_ROSCS
Outer membrane adhesin like protein {ECO:0000313|EMBL:GAN35354.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia
fibronectin type III domain-containing protein
Displaying 27 items

View Taxonomy