ggKbase home page

qh_7_scaffold_44

Search features with annotation key words

Displaying items 1-30 of 31 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_44_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2..106)
DNA (105bp) protein (35aa)
lipA; lipoyl synthase; K03644 lipoic acid synthetase [EC:2.8.1.8] id=24657668 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206, ECO:0000313|EMBL:CBH23895.1}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|
lipA; lipoyl synthase
qh_7_scaffold_44_2
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

532..1536
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I253_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL99340.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
qh_7_scaffold_44_3
unknown

Not on your lists

1646..2134
DNA (489bp) protein (163aa)

This feature has no annotations

qh_7_scaffold_44_4
unknown

Not on your lists

2212..2472
DNA (261bp) protein (87aa)

This feature has no annotations

qh_7_scaffold_44_5
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2518..3183
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4IZ96_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESQ15772.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source
hypothetical protein
qh_7_scaffold_44_6
unknown

Not on your lists

3252..4295
DNA (1044bp) protein (348aa)

This feature has no annotations

qh_7_scaffold_44_7
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4383..6260
DNA (1878bp) protein (626aa)
Phage tail sheath protein, putative n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N8P2_ERYLH
phage tail sheath protein
Phage tail sheath protein, putative {ECO:0000313|EMBL:ABC63949.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="E
qh_7_scaffold_44_8
Rhodococcus rhodochrous, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6364..6822
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WNG9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:ETT24104.1}; TaxID=1429046 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous ATCC 21198.;"
hypothetical protein
qh_7_scaffold_44_9
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6877..9885
DNA (3009bp) protein (1003aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4LG29_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESQ15768.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source
phage tail sheath protein FI
qh_7_scaffold_44_10
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9952..10446
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4IZ91_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESQ15767.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source
hypothetical protein
qh_7_scaffold_44_11
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

10515..11249
DNA (735bp) protein (245aa)
Uncharacterized protein id=3598720 bin=GWC2_Nitrospirae-rel_56_14 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein Tax=GWC2_Nitrospirae_56_14_curated
hypothetical protein
qh_7_scaffold_44_12
unknown

Not on your lists

11303..11482
DNA (180bp) protein (60aa)

This feature has no annotations

qh_7_scaffold_44_13
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11543..12631
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MX67_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE04875.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cor
qh_7_scaffold_44_14
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

12668..13399
DNA (732bp) protein (244aa)
Uncharacterized protein id=3598714 bin=GWC2_Nitrospirae-rel_56_14 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein Tax=GWC2_Nitrospirae_56_14_curated
hypothetical protein
qh_7_scaffold_44_15
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13444..15261
DNA (1818bp) protein (606aa)
Uncharacterized protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GD49_NITSI
Uncharacterized protein {ECO:0000313|EMBL:AEJ00875.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp.
hypothetical protein
qh_7_scaffold_44_16
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15355..15729
DNA (375bp) protein (125aa)
Baseplate assembly protein W n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MX64_CORCM
baseplate assembly protein W
Baseplate assembly protein W {ECO:0000313|EMBL:AFE04872.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source
qh_7_scaffold_44_17
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

15795..18050
DNA (2256bp) protein (752aa)
Uncharacterized protein id=3598705 bin=GWC2_Nitrospirae-rel_56_14 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Tax=BJP_IG2157_Anaerolineales_55_23
qh_7_scaffold_44_18
Rhodococcus rhodochrous, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18116..21079
DNA (2964bp) protein (988aa)
Phage tail protein {ECO:0000313|EMBL:ETT24114.1}; TaxID=1429046 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous ATCC 21198.;"
Putative phage tail protein id=3598703 bin=GWC2_Nitrospirae-rel_56_14 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
putative phage tail protein
qh_7_scaffold_44_19
Rhodococcus rhodochrous, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21146..23590
DNA (2445bp) protein (815aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4L3T6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ETT24115.1}; TaxID=1429046 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous ATCC 21198.;"
hypothetical protein
qh_7_scaffold_44_20
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

23642..25063
DNA (1422bp) protein (474aa)
Uncharacterized protein id=4109794 bin=GWC2_Nitrospirae-rel_56_14 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein Tax=GWC2_Nitrospirae_56_14_curated
hypothetical protein
qh_7_scaffold_44_21
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25100..26248
DNA (1149bp) protein (383aa)
Uncharacterized protein {ECO:0000313|EMBL:KFA94325.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
qh_7_scaffold_44_22
unknown

Not on your lists

26337..28562
DNA (2226bp) protein (742aa)

This feature has no annotations

qh_7_scaffold_44_23
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

28575..30554
DNA (1980bp) protein (660aa)
Uncharacterized protein id=4109800 bin=GWC2_Nitrospirae-rel_56_14 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein Tax=GWC2_Nitrospirae_56_14_curated
hypothetical protein
qh_7_scaffold_44_24
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30584..32827
DNA (2244bp) protein (748aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JBL6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESQ11839.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source
pan; AAA ATPase
qh_7_scaffold_44_25
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

33065..34516
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXH9_METHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB49801.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanometh
qh_7_scaffold_44_26
unknown

Not on your lists

34960..35508
DNA (549bp) protein (183aa)

This feature has no annotations

qh_7_scaffold_44_27
unknown

Not on your lists

comp(35699..35989)
DNA (291bp) protein (97aa)

This feature has no annotations

qh_7_scaffold_44_28
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

35994..36656
DNA (663bp) protein (221aa)
Subtilisin-like serine protease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWY9_9EURY
Subtilisin-like serine protease {ECO:0000313|EMBL:EMA49838.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
subtilisin-like serine protease
qh_7_scaffold_44_29
unknown

Not on your lists

36939..37256
DNA (318bp) protein (106aa)

This feature has no annotations

qh_7_scaffold_44_30
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37355..37858
DNA (504bp) protein (168aa)
Peptidoglycan-binding domain 1 protein id=4498238 bin=GWC2_Pelobacter_58_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
peptidoglycan binding domain-containing protein Tax=GWC2_Pelobacteraceae_58_13_curated
peptidoglycan-binding domain-containing protein
Displaying items 1-30 of 31 in total

View Taxonomy