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qh_7_scaffold_889

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_889_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(408..1508)
DNA (1101bp) protein (367aa)
DNA topoisomerase (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00132};; Type II DNA topoisomerase VI subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; TaxID=
DNA topoisomerase VI subunit A n=1 Tax=Halomicrobium katesii RepID=UPI0003628C2E
qh_7_scaffold_889_2
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1510..2574)
DNA (1065bp) protein (355aa)
DNA topoisomerase VI subunit B (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00322};; Type II DNA topoisomerase VI subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; TaxID=
Type 2 DNA topoisomerase 6 subunit B n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JVN3_9EURY
qh_7_scaffold_889_3
unknown

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3237..3422
DNA (186bp) protein (62aa)

This feature has no annotations

qh_7_scaffold_889_4
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5495..7426
DNA (1932bp) protein (644aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1227453 species="Archaea; Eu
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LCA7_HALJP
qh_7_scaffold_889_5
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7423..7833
DNA (411bp) protein (137aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H
DNA gyrase subunit A n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JQC3_HALVA
DNA gyrase subunit A
qh_7_scaffold_889_6
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7862..8923
DNA (1062bp) protein (354aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LAY4_HALJP
qh_7_scaffold_889_7
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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9001..9255
DNA (255bp) protein (85aa)
HEPN domain-containing nucleotidyltransferase {ECO:0000313|EMBL:KHK00539.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibri
qh_7_scaffold_889_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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9287..10141
DNA (855bp) protein (285aa)
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:CBH23555.1}; EC=2.1.1.64 {ECO:0000313|EMBL:CBH23555.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae se
methyltransferase type 11 n=1 Tax=Salisaeta longa RepID=UPI0003B63069
ubiG; 3-demethylubiquinone-9 3-methyltransferase
qh_7_scaffold_889_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10361..10564
DNA (204bp) protein (68aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sed
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFB4_RHOM4
zinc-binding CMP/dCMP deaminase protein
qh_7_scaffold_889_10
unknown

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comp(10574..10795)
DNA (222bp) protein (74aa)

This feature has no annotations

qh_7_scaffold_889_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(10888..12111)
DNA (1224bp) protein (408aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MF32_RHOM4
PAS/PAC sensor signal transduction histidine kinase
qh_7_scaffold_889_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12312..13406)
DNA (1095bp) protein (365aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
chorismate synthase n=1 Tax=Salisaeta longa RepID=UPI0003B57679
chorismate synthase
qh_7_scaffold_889_13
unknown

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comp(13413..13709)
DNA (297bp) protein (99aa)

This feature has no annotations

qh_7_scaffold_889_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13732..15363)
DNA (1632bp) protein (544aa)
protease Do (EC:3.4.21.108)
Protease Do {ECO:0000313|EMBL:AEN73719.1}; EC=3.4.21.108 {ECO:0000313|EMBL:AEN73719.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodoth
Protease Do n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHW1_RHOMR
qh_7_scaffold_889_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15562..18783)
DNA (3222bp) protein (1074aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Two-component system sensor histidine kinase/response regulator, hybrid n=2 Tax=Salinibacter ruber RepID=D5HAZ7_SALRM
two-component system sensor histidine kinase/response regulator, hybrid
qh_7_scaffold_889_16
unknown

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19088..19324
DNA (237bp) protein (79aa)

This feature has no annotations

qh_7_scaffold_889_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19483..20379
DNA (897bp) protein (299aa)
deacetylase n=1 Tax=Salisaeta longa RepID=UPI0003B3AFFA
histone deacetylase
Histone deacetylase/AcuC/AphA family protein {ECO:0000313|EMBL:ABC45685.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sour
qh_7_scaffold_889_18
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(20414..20839)
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V1V7_ROSS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ92860.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp.
qh_7_scaffold_889_19
unknown

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comp(20823..21206)
DNA (384bp) protein (128aa)

This feature has no annotations

qh_7_scaffold_889_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21218..22129)
DNA (912bp) protein (304aa)
hemK; protein methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] id=24658003 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltra
hemK; protein methyltransferase
qh_7_scaffold_889_21
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22314..23036
DNA (723bp) protein (241aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGI3_RHOMR
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEN73679.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="R
qh_7_scaffold_889_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23115..23402)
DNA (288bp) protein (96aa)
yccX; acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] id=24658004 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Acylphosphatase; EC=3.6.1.7;; Acylphosphate phosphohydrolase; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
acylphosphatase
qh_7_scaffold_889_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23512..24570)
DNA (1059bp) protein (353aa)
phhA; phenylalanine-4-hydroxylase; K00500 phenylalanine-4-hydroxylase [EC:1.14.16.1] id=24658005 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phenylalanine-4-hydroxylase {ECO:0000313|EMBL:CBH25207.1}; EC=1.14.16.4 {ECO:0000313|EMBL:CBH25207.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
phhA; phenylalanine-4-hydroxylase
Displaying 23 items

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