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QH_7_UNK

In projects: QH_7  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 25.29 Longest contig: 83.04 Kbp Bin length: 52.16 Mbp GC content: 60.76 %
Contigs count: 21495 Features count: 67681 rRNAs count: 18 tRNAs count: 616

Genome completeness

megabin RP 53 / 55 MC: 42 BSCG 42 / 51 MC: 32 ASCG 38 / 38 MC: 38
Displaying items 251-300 of 21495 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_7_scaffold_20746
Species: Salinibacter ruber (50%)
2 1150 bp 68.09 7.65 100.70
qh_7_scaffold_17516
Species: Halococcus saccharolyticus (50%)
4 1299 bp 67.67 10.32 100.69
qh_7_scaffold_24308
Species: Halosimplex carlsbadense (50%)
2 1019 bp 64.87 9.52 100.69
qh_7_scaffold_11292
Genus: Haloarcula (100%)
3 1755 bp 71.62 25.98 100.68
qh_7_scaffold_20073
Species: Halogeometricum borinquense (50%)
2 1177 bp 67.46 7.31 100.68
qh_7_scaffold_23851
Species: Sorangium cellulosum (50%)
2 1034 bp 61.90 7.16 100.68
qh_7_scaffold_23754
Species: Halorubrum kocurii (100%)
2 1037 bp 66.44 77.63 100.68
qh_7_scaffold_16633
Species: Halomicrobium mukohataei (50%)
2 1347 bp 71.05 8.76 100.67
qh_7_scaffold_14289
Phylum: Euryarchaeota (80%)
5 1502 bp 67.04 6.66 100.67
qh_7_scaffold_7256
Order: Halobacteriales (50%)
4 3168 bp 68.34 37.82 100.66
qh_7_scaffold_19400
Species: Sphaerobacter thermophilus (50%)
2 1207 bp 66.36 10.69 100.66
qh_7_scaffold_19349
Species: RBG_16_Deltaproteobacteria_71_12_curated (50%)
2 1210 bp 57.44 6.20 100.66
qh_7_scaffold_19293
Species: Candidatus Halobonum tyrrellensis (50%)
2 1213 bp 73.70 45.26 100.66
qh_7_scaffold_12152
Species: Natronococcus jeotgali (50%)
2 1675 bp 51.40 4.72 100.66
qh_7_scaffold_22910
Species: Halosimplex carlsbadense (66.67%)
3 1067 bp 68.79 17.15 100.66
qh_7_scaffold_40818
Species: Halogranum salarium (100%)
2 1228 bp 62.79 10.99 100.65
qh_7_scaffold_16053
Class: Halobacteria (66.67%)
3 1383 bp 63.63 16.63 100.65
qh_7_scaffold_22663
Species: Cyanothece sp. PCC 7424 (50%)
2 1076 bp 57.06 9.20 100.65
qh_7_scaffold_22585
Species: Mycobacterium phage Nerujay (50%)
2 1079 bp 41.80 5.19 100.65
qh_7_scaffold_15898
Species: Candidatus Halobonum tyrrellensis (50%)
2 1392 bp 58.19 5.03 100.65
qh_7_scaffold_15761
Species: Haloterrigena thermotolerans (100%)
2 1401 bp 66.24 10.42 100.64
qh_7_scaffold_22101
Species: Haloferax larsenii (50%)
2 1097 bp 66.45 28.62 100.64
qh_7_scaffold_3171
Species: Halarchaeum acidiphilum (60%)
5 4570 bp 56.98 21.11 100.64
qh_7_scaffold_17290
Domain: Bacteria (66.67%)
3 2373 bp 67.59 75.81 100.63
qh_7_scaffold_26380
Species: Halococcus morrhuae (50%)
2 1741 bp 66.28 29.92 100.63
qh_7_scaffold_17584
Species: Halovivax asiaticus (50%)
2 1294 bp 67.77 11.13 100.62
qh_7_scaffold_21177
Species: Oceaniovalibus guishaninsula (50%)
2 1133 bp 61.78 7.15 100.62
qh_7_scaffold_14562
Species: Halosimplex carlsbadense (100%)
2 1482 bp 69.03 15.32 100.61
qh_7_scaffold_17079
Species: Natrinema gari (50%)
2 1324 bp 60.95 16.09 100.60
qh_7_scaffold_15841 3 2493 bp 62.74 83.92 100.60
qh_7_scaffold_4550
Phylum: Euryarchaeota (50%)
4 3158 bp 70.93 8.99 100.60
qh_7_scaffold_20200
Species: Haloterrigena turkmenica (50%)
2 1172 bp 77.65 59.98 100.60
qh_7_scaffold_43105
Species: Haloarcula vallismortis (100%)
2 1178 bp 57.13 5.94 100.59
qh_7_scaffold_16435
Order: Halobacteriales (66.67%)
3 1360 bp 41.91 5.88 100.59
qh_7_scaffold_24193
Species: Leptolyngbya sp. Heron Island J (50%)
2 1023 bp 65.69 74.68 100.59
qh_7_scaffold_24095
Species: Haloarcula sp. D1 (100%)
2 1026 bp 69.79 8.67 100.59
qh_7_scaffold_19503
Species: Natronomonas pharaonis (50%)
2 1202 bp 69.97 48.17 100.58
qh_7_scaffold_23814
Species: Emticicia oligotrophica (50%)
2 1035 bp 55.17 5.99 100.58
qh_7_scaffold_19005
Species: Streptococcus gallolyticus (50%)
2 1226 bp 70.64 8.97 100.57
qh_7_scaffold_9810
Genus: Halococcus (66.67%)
3 1927 bp 63.83 15.88 100.57
qh_7_scaffold_15698
Species: Natrinema pellirubrum (100%)
2 1405 bp 60.64 9.25 100.57
qh_7_scaffold_18562
Species: Halorubrum lacusprofundi (50%)
2 1247 bp 65.84 7.38 100.56
qh_7_scaffold_18499
Species: Halomicrobium mukohataei (50%)
2 1250 bp 72.80 20.56 100.56
qh_7_scaffold_12256
Order: Halobacteriales (60%)
5 3592 bp 69.07 51.89 100.56
qh_7_scaffold_19329
Species: Haloferax mucosum (50%)
2 1617 bp 72.23 29.77 100.56
qh_7_scaffold_22398
Genus: Natronomonas (66.67%)
3 1086 bp 71.27 23.11 100.55
qh_7_scaffold_22417
Species: Halorubrum saccharovorum (100%)
2 1086 bp 79.83 31.86 100.55
qh_7_scaffold_44585
Species: Natronococcus occultus (50%)
2 1095 bp 69.68 16.33 100.55
qh_7_scaffold_17752
Species: Pseudooceanicola atlanticus (50%)
2 1286 bp 64.23 19.67 100.54
qh_7_scaffold_14644
Species: Natronomonas moolapensis (50%)
4 1477 bp 68.11 67.16 100.54
Displaying items 251-300 of 21495 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.