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QH_7_UNK

In projects: QH_7  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 25.29 Longest contig: 83.04 Kbp Bin length: 52.16 Mbp GC content: 60.76 %
Contigs count: 21495 Features count: 67681 rRNAs count: 18 tRNAs count: 616

Genome completeness

megabin RP 53 / 55 MC: 42 BSCG 42 / 51 MC: 32 ASCG 38 / 38 MC: 38
Displaying items 301-350 of 21495 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_7_scaffold_9038
Species: Natrinema pellirubrum (66.67%)
3 2032 bp 57.92 12.16 100.54
qh_7_scaffold_7848
Species: Halosimplex carlsbadense (100%)
3 2217 bp 69.19 34.55 100.54
qh_7_scaffold_17478
Class: Halobacteria (100%)
3 1301 bp 69.64 12.84 100.54
qh_7_scaffold_21522
Species: GWB1_OP11_38_8 (50%)
2 1119 bp 51.92 8.40 100.54
qh_7_scaffold_17260 3 1313 bp 46.31 5.64 100.53
qh_7_scaffold_14249
Species: Halorhabdus tiamatea (50%)
2 1504 bp 55.65 5.05 100.53
qh_7_scaffold_21229
Species: Halococcus morrhuae (50%)
2 1131 bp 55.35 5.22 100.53
qh_7_scaffold_20998
Species: Halanaeroarchaeum sulfurireducens (50%)
2 1140 bp 57.46 23.16 100.53
qh_7_scaffold_13883 3 1531 bp 57.87 9.60 100.52
qh_7_scaffold_9863
Order: Halobacteriales (50%)
4 1919 bp 67.48 42.99 100.52
qh_7_scaffold_20551
Species: Natronomonas pharaonis (66.67%)
3 1158 bp 69.78 26.08 100.52
qh_7_scaffold_10497
Species: uncultured archaeon A07HR67 (75%)
4 2361 bp 68.83 65.23 100.51
qh_7_scaffold_15976
Species: Halococcus salifodinae (50%)
2 1388 bp 70.97 10.23 100.50
qh_7_scaffold_15873
Species: Halosimplex carlsbadense (100%)
2 1394 bp 69.87 11.76 100.50
qh_7_scaffold_10877 4 1800 bp 69.50 8.56 100.50
qh_7_scaffold_19322
Species: Halorubrum saccharovorum (50%)
2 1212 bp 65.92 20.38 100.50
qh_7_scaffold_12550
Species: Halosimplex carlsbadense (50%)
2 1639 bp 68.21 60.22 100.49
qh_7_scaffold_14707
Class: Halobacteria (66.67%)
3 1472 bp 56.32 12.64 100.48
qh_7_scaffold_6442
Species: Halomicrobium mukohataei (66.67%)
3 2529 bp 72.56 43.30 100.48
qh_7_scaffold_17729 3 1287 bp 57.19 8.16 100.47
qh_7_scaffold_9728 3 1935 bp 31.63 4.96 100.47
qh_7_scaffold_13830
Species: halophilic archaeon J07HX5 (50%)
2 1535 bp 65.02 13.16 100.46
qh_7_scaffold_22047 3 1099 bp 53.87 11.01 100.46
qh_7_scaffold_21566 3 1117 bp 72.16 49.33 100.45
qh_7_scaffold_39198
Genus: Halococcus (66.67%)
3 1341 bp 68.61 7.90 100.45
qh_7_scaffold_5125
Species: uncultured Acetothermia bacterium (50%)
2 2921 bp 67.00 70.49 100.45
qh_7_scaffold_9381
Domain: Archaea (50%)
4 2482 bp 66.68 8.10 100.44
qh_7_scaffold_8977
Genus: Natronorubrum (66.67%)
3 2040 bp 73.97 50.64 100.44
qh_7_scaffold_16267
Species: Peptostreptococcus anaerobius CAG:621 (50%)
2 1371 bp 65.94 8.68 100.44
qh_7_scaffold_24462
Species: Haloterrigena limicola (50%)
2 1843 bp 69.51 9.50 100.43
qh_7_scaffold_4782
Domain: Bacteria (75%)
4 3919 bp 66.52 88.03 100.43
qh_7_scaffold_4742
Species: Haloarcula sinaiiensis (60%)
5 3973 bp 69.37 11.53 100.43
qh_7_scaffold_19980
Species: uncultured archaeon A07HN63 (100%)
2 1180 bp 62.80 7.88 100.42
qh_7_scaffold_5369
Genus: Halorhabdus (50%)
4 2835 bp 69.28 12.10 100.42
qh_7_scaffold_19905
Species: Halalkalicoccus jeotgali (50%)
2 1183 bp 69.99 10.31 100.42
qh_7_scaffold_15262
Phylum: Cyanobacteria (66.67%)
3 1434 bp 57.25 12.13 100.42
qh_7_scaffold_8149
Domain: Archaea (50%)
4 2169 bp 62.66 8.71 100.42
qh_7_scaffold_28197
Class: Halobacteria (66.67%)
3 1452 bp 71.69 8.54 100.41
qh_7_scaffold_14918
Species: Haloferax elongans (50%)
2 1458 bp 69.41 14.68 100.41
qh_7_scaffold_14666
Species: Halosimplex carlsbadense (100%)
2 1476 bp 74.19 10.43 100.41
qh_7_scaffold_14525
Species: halophilic archaeon J07HX64 (100%)
2 1485 bp 64.71 7.81 100.40
qh_7_scaffold_18709
Species: Natronomonas pharaonis (100%)
2 1240 bp 71.53 33.79 100.40
qh_7_scaffold_15668
Order: Halobacteriales (66.67%)
3 2002 bp 67.63 10.24 100.40
qh_7_scaffold_24797
Species: Natrialba phage PhiCh1 (50%)
2 1004 bp 65.14 9.46 100.40
qh_7_scaffold_9161
Class: Halobacteria (100%)
3 2014 bp 57.45 7.80 100.40
qh_7_scaffold_9116
Species: Haloferax elongans (66.67%)
3 2020 bp 47.13 7.33 100.40
qh_7_scaffold_24598
Species: halophilic archaeon J07HX64 (50%)
2 1010 bp 61.88 6.24 100.40
qh_7_scaffold_18089
Species: Thermococcus kodakarensis (50%)
2 1270 bp 44.17 7.17 100.39
qh_7_scaffold_7354
Order: Halobacteriales (50%)
4 2313 bp 70.30 53.26 100.39
qh_7_scaffold_24037
Species: Natrialba hulunbeirensis (100%)
2 1028 bp 49.61 4.77 100.39
Displaying items 301-350 of 21495 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.