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QH_7_UNK

In projects: QH_7  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 25.29 Longest contig: 83.04 Kbp Bin length: 52.16 Mbp GC content: 60.76 %
Contigs count: 21495 Features count: 67681 rRNAs count: 18 tRNAs count: 616

Genome completeness

megabin RP 53 / 55 MC: 42 BSCG 42 / 51 MC: 32 ASCG 38 / 38 MC: 38
Displaying items 351-400 of 21495 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_7_scaffold_24038
Species: Natronococcus occultus (50%)
2 1028 bp 62.74 11.77 100.39
qh_7_scaffold_13722 3 1545 bp 44.08 7.64 100.39
qh_7_scaffold_23838
Species: RLO_WWE3_36_10 (50%)
2 1034 bp 32.50 3.77 100.39
qh_7_scaffold_23601
Species: Halosimplex carlsbadense (50%)
2 1043 bp 72.96 39.31 100.38
qh_7_scaffold_10621
Species: GWA2_OD1_47_21_part (50%)
2 1826 bp 57.28 29.35 100.38
qh_7_scaffold_23501
Species: Halalkalicoccus jeotgali (50%)
2 1046 bp 58.13 5.83 100.38
qh_7_scaffold_13304
Order: Halobacteriales (66.67%)
3 1575 bp 69.14 9.84 100.38
qh_7_scaffold_23333
Species: Halorhabdus tiamatea (50%)
2 1052 bp 71.58 17.49 100.38
qh_7_scaffold_3691
Species: Methanoplanus limicola (50%)
4 5798 bp 45.91 7.28 100.38
qh_7_scaffold_23025
Species: Halorhabdus utahensis (50%)
2 1064 bp 57.52 4.89 100.38
qh_7_scaffold_22764
Species: Halosimplex carlsbadense (100%)
3 1073 bp 64.86 13.70 100.37
qh_7_scaffold_22669
Species: Rhizobium leguminosarum (50%)
2 1076 bp 64.50 10.13 100.37
qh_7_scaffold_16624 3 1348 bp 32.72 4.67 100.37
qh_7_scaffold_10082
Genus: Haloferax (100%)
3 1892 bp 64.53 12.95 100.37
qh_7_scaffold_8179
Species: Halococcus thailandensis (100%)
3 2164 bp 58.13 11.55 100.37
qh_7_scaffold_22488
Class: Halobacteria (66.67%)
3 1082 bp 58.41 7.30 100.37
qh_7_scaffold_22438
Species: halophilic archaeon J07HX64 (100%)
2 1085 bp 50.23 9.86 100.37
qh_7_scaffold_9997
Species: R_Acidobacteria_67_28 (50%)
2 1901 bp 62.76 7.10 100.37
qh_7_scaffold_12634
Species: Halarchaeum acidiphilum (50%)
2 1632 bp 54.29 8.64 100.37
qh_7_scaffold_6748
Species: Halosimplex carlsbadense (100%)
5 2454 bp 66.95 19.23 100.37
qh_7_scaffold_22248
Species: halophilic archaeon J07HX64 (100%)
2 1091 bp 60.04 14.02 100.37
qh_7_scaffold_12563
Species: marine sediment metagenome (50%)
2 1638 bp 50.98 5.37 100.37
qh_7_scaffold_9886
Species: marine sediment metagenome (66.67%)
3 1916 bp 39.14 31.21 100.37
qh_7_scaffold_21999
Species: Salinibacter ruber (100%)
2 1100 bp 62.00 38.64 100.36
qh_7_scaffold_12347
Class: Halobacteria (66.67%)
3 1656 bp 61.35 8.03 100.36
qh_7_scaffold_9733 3 1934 bp 55.38 13.39 100.36
qh_7_scaffold_19729
Order: Halobacteriales (66.67%)
3 1665 bp 68.89 42.94 100.36
qh_7_scaffold_21468
Species: Natronomonas pharaonis (100%)
2 1121 bp 75.47 32.83 100.36
qh_7_scaffold_7906 3 3366 bp 53.98 7.13 100.36
qh_7_scaffold_9467
Phylum: Euryarchaeota (75%)
4 1970 bp 68.32 7.46 100.35
qh_7_scaffold_21246
Species: Natronomonas pharaonis (100%)
2 1130 bp 72.04 36.37 100.35
qh_7_scaffold_21253
Species: Halosimplex carlsbadense (100%)
2 1130 bp 71.59 11.15 100.35
qh_7_scaffold_15547
Order: Halobacteriales (66.67%)
3 1414 bp 57.36 10.68 100.35
qh_7_scaffold_20055
Species: Haloarcula argentinensis (50%)
2 2831 bp 66.69 16.99 100.35
qh_7_scaffold_21181 2 1133 bp 48.19 4.41 100.35
qh_7_scaffold_9331 3 1988 bp 37.73 5.58 100.35
qh_7_scaffold_21112
Species: Lentisphaera araneosa (50%)
2 1136 bp 66.81 7.57 100.35
qh_7_scaffold_9287
Domain: Bacteria (66.67%)
3 1994 bp 50.85 6.07 100.35
qh_7_scaffold_15118
Class: Halobacteria (66.67%)
3 1444 bp 68.98 19.39 100.35
qh_7_scaffold_20426
Species: Haloarcula sinaiiensis (50%)
2 1163 bp 44.80 5.16 100.34
qh_7_scaffold_28673
Species: marine sediment metagenome (50%)
2 1746 bp 61.23 8.13 100.34
qh_7_scaffold_20182 3 1172 bp 40.27 4.86 100.34
qh_7_scaffold_14780
Species: Haloterrigena turkmenica (50%)
2 1468 bp 75.27 40.87 100.34
qh_7_scaffold_20099
Species: Natrinema versiforme (50%)
2 1175 bp 62.38 9.62 100.34
qh_7_scaffold_20110
Species: Haladaptatus paucihalophilus (50%)
2 1175 bp 61.79 6.81 100.34
qh_7_scaffold_20023
Species: Methanocaldococcus infernus (50%)
2 1178 bp 72.67 9.68 100.34
qh_7_scaffold_20038
Species: Halorhabdus utahensis (100%)
2 1178 bp 68.08 9.85 100.34
qh_7_scaffold_20888
Order: Haloferacales (66.67%)
3 2072 bp 66.26 9.46 100.34
qh_7_scaffold_5912
Species: Haloferax sulfurifontis (100%)
3 2670 bp 65.54 8.20 100.34
qh_7_scaffold_19824
Species: Haloquadratum walsbyi (50%)
2 1187 bp 51.90 5.22 100.34
Displaying items 351-400 of 21495 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.