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QH_7_Oscillatoriophycideae_48_89

In projects: QH_7

Consensus taxonomy: Oscillatoriophycideae  →  Cyanobacteria  →  Bacteria

Taxonomy override: Cyanobacteria

Metagenomic Context

Parent: QH_7_UNK

Properties

Avg. coverage: 89.43 Longest contig: 92.36 Kbp Bin length: 3.52 Mbp GC content: 48.25 %
Contigs count: 272 Features count: 3463 rRNAs count: 1 tRNAs count: 41

Genome completeness

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Displaying items 101-150 of 272 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_7_scaffold_1006
Phylum: Cyanobacteria (60%)
5 10588 bp 45.51 89.20 76.13
qh_7_scaffold_3954
Phylum: Cyanobacteria (60%)
5 4357 bp 47.14 89.21 61.83
qh_7_scaffold_938
Phylum: Cyanobacteria (69.23%)
13 8750 bp 47.47 89.21 81.53
qh_7_scaffold_4843
Class: Oscillatoriophycideae (60%)
5 3024 bp 48.05 89.22 86.61
qh_7_scaffold_3184
Species: Coleofasciculus chthonoplastes (50%)
8 6369 bp 48.63 89.29 82.34
qh_7_scaffold_767
Phylum: Cyanobacteria (100%)
9 9759 bp 49.98 89.37 77.99
qh_7_scaffold_2278
Class: Oscillatoriophycideae (66.67%)
6 7874 bp 49.06 89.42 77.34
qh_7_scaffold_778
Class: Oscillatoriophycideae (52.38%)
21 27594 bp 49.88 89.47 84.33
qh_7_scaffold_3923
Phylum: Cyanobacteria (71.43%)
7 3485 bp 47.80 89.47 83.24
qh_7_scaffold_629
Order: Oscillatoriales (53.85%)
13 10875 bp 49.77 89.48 88.28
qh_7_scaffold_158
Order: Oscillatoriales (53.33%)
30 27403 bp 48.76 89.49 81.32
qh_7_scaffold_276
Order: Oscillatoriales (54.55%)
22 21059 bp 48.96 89.55 83.19
qh_7_scaffold_160
Class: Oscillatoriophycideae (60%)
25 30276 bp 49.11 89.56 85.89
qh_7_scaffold_477
Phylum: Cyanobacteria (100%)
11 12560 bp 49.39 89.58 83.46
qh_7_scaffold_202
Class: Oscillatoriophycideae (76.19%)
21 23925 bp 48.90 89.59 78.04
qh_7_scaffold_1026
Class: Oscillatoriophycideae (70.59%)
17 14777 bp 48.35 89.60 76.48
qh_7_scaffold_3868
Phylum: Cyanobacteria (60%)
5 3514 bp 49.23 89.64 82.98
qh_7_scaffold_176
Class: Oscillatoriophycideae (52.78%)
36 35456 bp 48.49 89.67 76.02
qh_7_scaffold_177
Phylum: Cyanobacteria (73.33%)
15 20180 bp 49.08 89.67 82.42
qh_7_scaffold_1132
Species: Microcoleus sp. PCC 7113 (50%)
4 7691 bp 49.86 89.73 91.20
qh_7_scaffold_199
Phylum: Cyanobacteria (58.82%)
17 18562 bp 50.00 89.82 74.20
qh_7_scaffold_916
Order: Oscillatoriales (70%)
10 9983 bp 48.88 89.88 87.93
qh_7_scaffold_73
Order: Oscillatoriales (73.91%)
23 28076 bp 48.27 89.91 80.30
qh_7_scaffold_472
Phylum: Cyanobacteria (77.78%)
18 13580 bp 48.18 90.14 73.62
qh_7_scaffold_387
Class: Oscillatoriophycideae (66.67%)
15 13819 bp 47.78 90.19 75.01
qh_7_scaffold_84
Class: Oscillatoriophycideae (56.67%)
30 27235 bp 48.32 90.22 80.30
qh_7_scaffold_1294
Class: Oscillatoriophycideae (55.56%)
9 7105 bp 49.56 90.22 77.83
qh_7_scaffold_647
Class: Oscillatoriophycideae (60.87%)
23 21423 bp 48.34 90.25 80.88
qh_7_scaffold_1546
Species: Microcoleus sp. PCC 7113 (50%)
6 6350 bp 50.00 90.52 83.10
qh_7_scaffold_3690
Order: Oscillatoriales (60%)
5 5935 bp 46.25 90.56 79.71
qh_7_scaffold_68
Order: Chroococcales (56.25%)
32 32984 bp 48.44 90.56 80.04
qh_7_scaffold_3748
Order: Pleurocapsales (50%)
8 3594 bp 50.67 90.62 75.96
qh_7_scaffold_11369
Phylum: Cyanobacteria (50%)
4 3528 bp 43.06 90.65 29.59
qh_7_scaffold_74
Class: Oscillatoriophycideae (66.67%)
33 33524 bp 48.38 90.68 79.97
qh_7_scaffold_625
Class: Oscillatoriophycideae (59.38%)
32 33852 bp 47.70 90.68 78.61
qh_7_scaffold_3067
Order: Oscillatoriales (50%)
4 4119 bp 48.94 90.70 70.87
qh_7_scaffold_89
Class: Oscillatoriophycideae (65.71%)
35 35794 bp 48.05 90.72 80.89
qh_7_scaffold_1970
Phylum: Cyanobacteria (100%)
8 6338 bp 47.00 90.74 81.70
qh_7_scaffold_224
Class: Oscillatoriophycideae (50%)
14 19223 bp 48.69 90.76 79.95
qh_7_scaffold_422
Class: Oscillatoriophycideae (60%)
10 13674 bp 49.47 90.76 81.22
qh_7_scaffold_875
Class: Oscillatoriophycideae (68.75%)
16 19135 bp 49.08 90.78 80.13
qh_7_scaffold_658
Class: Oscillatoriophycideae (62.5%)
8 10596 bp 48.55 90.84 85.28
qh_7_scaffold_365
Phylum: Cyanobacteria (75%)
24 22735 bp 49.42 90.91 79.16
qh_7_scaffold_487
Phylum: Cyanobacteria (68.75%)
16 12459 bp 48.26 90.93 72.78
qh_7_scaffold_187
Class: Oscillatoriophycideae (72.22%)
18 19043 bp 48.13 91.06 81.70
qh_7_scaffold_2671
Order: Oscillatoriales (50%)
6 4528 bp 48.21 91.10 78.71
qh_7_scaffold_49
Phylum: Cyanobacteria (78.57%)
28 33459 bp 50.07 91.14 86.34
qh_7_scaffold_335
Class: Oscillatoriophycideae (69.23%)
13 14604 bp 48.99 91.16 76.24
qh_7_scaffold_356
Class: Oscillatoriophycideae (72.97%)
37 40338 bp 48.72 91.21 79.64
qh_7_scaffold_51
Class: Oscillatoriophycideae (62.07%)
29 33161 bp 49.29 91.24 84.86
Displaying items 101-150 of 272 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.