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QH_7_Oscillatoriophycideae_48_89

In projects: QH_7

Consensus taxonomy: Oscillatoriophycideae  →  Cyanobacteria  →  Bacteria

Taxonomy override: Cyanobacteria

Metagenomic Context

Parent: QH_7_UNK

Properties

Avg. coverage: 89.43 Longest contig: 92.36 Kbp Bin length: 3.52 Mbp GC content: 48.25 %
Contigs count: 272 Features count: 3463 rRNAs count: 1 tRNAs count: 41

Genome completeness

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Displaying items 151-200 of 272 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_7_scaffold_916
Order: Oscillatoriales (70%)
10 9983 bp 48.88 89.88 87.93
qh_7_scaffold_199
Phylum: Cyanobacteria (58.82%)
17 18562 bp 50.00 89.82 74.20
qh_7_scaffold_1132
Species: Microcoleus sp. PCC 7113 (50%)
4 7691 bp 49.86 89.73 91.20
qh_7_scaffold_176
Class: Oscillatoriophycideae (52.78%)
36 35456 bp 48.49 89.67 76.02
qh_7_scaffold_177
Phylum: Cyanobacteria (73.33%)
15 20180 bp 49.08 89.67 82.42
qh_7_scaffold_3868
Phylum: Cyanobacteria (60%)
5 3514 bp 49.23 89.64 82.98
qh_7_scaffold_1026
Class: Oscillatoriophycideae (70.59%)
17 14777 bp 48.35 89.60 76.48
qh_7_scaffold_202
Class: Oscillatoriophycideae (76.19%)
21 23925 bp 48.90 89.59 78.04
qh_7_scaffold_477
Phylum: Cyanobacteria (100%)
11 12560 bp 49.39 89.58 83.46
qh_7_scaffold_160
Class: Oscillatoriophycideae (60%)
25 30276 bp 49.11 89.56 85.89
qh_7_scaffold_276
Order: Oscillatoriales (54.55%)
22 21059 bp 48.96 89.55 83.19
qh_7_scaffold_158
Order: Oscillatoriales (53.33%)
30 27403 bp 48.76 89.49 81.32
qh_7_scaffold_629
Order: Oscillatoriales (53.85%)
13 10875 bp 49.77 89.48 88.28
qh_7_scaffold_778
Class: Oscillatoriophycideae (52.38%)
21 27594 bp 49.88 89.47 84.33
qh_7_scaffold_3923
Phylum: Cyanobacteria (71.43%)
7 3485 bp 47.80 89.47 83.24
qh_7_scaffold_2278
Class: Oscillatoriophycideae (66.67%)
6 7874 bp 49.06 89.42 77.34
qh_7_scaffold_767
Phylum: Cyanobacteria (100%)
9 9759 bp 49.98 89.37 77.99
qh_7_scaffold_3184
Species: Coleofasciculus chthonoplastes (50%)
8 6369 bp 48.63 89.29 82.34
qh_7_scaffold_4843
Class: Oscillatoriophycideae (60%)
5 3024 bp 48.05 89.22 86.61
qh_7_scaffold_3954
Phylum: Cyanobacteria (60%)
5 4357 bp 47.14 89.21 61.83
qh_7_scaffold_938
Phylum: Cyanobacteria (69.23%)
13 8750 bp 47.47 89.21 81.53
qh_7_scaffold_1006
Phylum: Cyanobacteria (60%)
5 10588 bp 45.51 89.20 76.13
qh_7_scaffold_246
Class: Oscillatoriophycideae (67.86%)
28 31959 bp 49.05 89.02 81.28
qh_7_scaffold_517
Class: Oscillatoriophycideae (63.33%)
30 29218 bp 48.36 88.97 80.33
qh_7_scaffold_934
Order: Oscillatoriales (55.56%)
9 8785 bp 49.22 88.95 89.33
qh_7_scaffold_1812
Species: Coleofasciculus chthonoplastes (50%)
4 6192 bp 46.58 88.94 78.29
qh_7_scaffold_670
Class: Oscillatoriophycideae (62.5%)
16 13549 bp 48.73 88.87 82.99
qh_7_scaffold_452
Phylum: Cyanobacteria (80%)
15 12813 bp 49.29 88.85 82.07
qh_7_scaffold_2772
Class: Oscillatoriophycideae (80%)
5 6436 bp 49.63 88.73 82.18
qh_7_scaffold_1446
Class: Oscillatoriophycideae (50%)
8 7599 bp 45.74 88.70 58.78
qh_7_scaffold_208
Class: Oscillatoriophycideae (81.25%)
16 18225 bp 49.33 88.66 85.81
qh_7_scaffold_3864
Class: Oscillatoriophycideae (66.67%)
3 3516 bp 49.80 88.65 89.42
qh_7_scaffold_285
Phylum: Cyanobacteria (90%)
20 15693 bp 48.49 88.61 81.28
qh_7_scaffold_216
Class: Oscillatoriophycideae (57.89%)
19 17664 bp 48.64 88.50 77.94
qh_7_scaffold_451
Class: Oscillatoriophycideae (93.33%)
15 16915 bp 49.24 88.44 84.92
qh_7_scaffold_907
Class: Oscillatoriophycideae (50%)
8 8957 bp 48.89 88.41 78.01
qh_7_scaffold_481
Order: Oscillatoriales (55.56%)
9 12518 bp 47.90 88.41 78.61
qh_7_scaffold_63
Class: Oscillatoriophycideae (65.06%)
83 92364 bp 49.10 88.32 81.31
qh_7_scaffold_301
Phylum: Cyanobacteria (80.95%)
21 22760 bp 49.19 88.31 80.77
qh_7_scaffold_574
Class: Oscillatoriophycideae (50%)
16 17147 bp 47.31 88.31 77.31
qh_7_scaffold_2568
Class: Oscillatoriophycideae (50%)
8 4632 bp 49.35 88.30 82.32
qh_7_scaffold_634
Class: Oscillatoriophycideae (56.25%)
16 10858 bp 47.43 88.30 73.94
qh_7_scaffold_38
Order: Oscillatoriales (51.22%)
41 46667 bp 48.24 88.17 86.82
qh_7_scaffold_2068
Class: Oscillatoriophycideae (61.54%)
13 11873 bp 49.68 88.09 79.20
qh_7_scaffold_692
Phylum: Cyanobacteria (81.82%)
11 10270 bp 49.65 87.64 74.58
qh_7_scaffold_5818
Order: Nostocales (50%)
6 4959 bp 49.38 87.64 74.47
qh_7_scaffold_2953
Order: Nostocales (50%)
4 4966 bp 44.91 87.60 81.07
qh_7_scaffold_233
Class: Oscillatoriophycideae (73.33%)
15 16963 bp 49.61 87.59 84.66
qh_7_scaffold_1548
Class: Oscillatoriophycideae (50%)
8 6354 bp 49.78 87.43 82.67
qh_7_scaffold_324
Order: Oscillatoriales (50%)
16 18299 bp 49.85 87.38 86.89
Displaying items 151-200 of 272 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.