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qh_7_scaffold_1048

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_1048_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2..259
DNA (258bp) protein (86aa)
Putative cold shock-like protein cspG n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S297_SALRD
cold shock-like protein cspG
Putative cold shock-like protein cspG {ECO:0000313|EMBL:ABC43651.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sal
qh_7_scaffold_1048_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(646..1299)
DNA (654bp) protein (218aa)
hisH; imidazole glycerol phosphate synthase subunit HisH; K02501 glutamine amidotransferase [EC:2.4.2.-] id=24659514 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278, ECO:0000313|EMBL:CBH24680.1};; IGP synthase glutamine amidotransferas
hisH; imidazole glycerol phosphate synthase subunit HisH
qh_7_scaffold_1048_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1392..2210)
DNA (819bp) protein (273aa)
Pyrroline-5-carboxylate reductase n=2 Tax=Salinibacter ruber RepID=D5H9H4_SALRM
proC; pyrroline-5-carboxylate reductase
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000313|EMBL:CBH24679.1}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};;
qh_7_scaffold_1048_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2328..2936)
DNA (609bp) protein (203aa)
hisB; imidazoleglycerol-phosphate dehydratase; K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] id=24659512 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|SAAS:SAAS00218099}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, E
hisB; imidazoleglycerol-phosphate dehydratase
qh_7_scaffold_1048_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3213..3539
DNA (327bp) protein (109aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24677.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein id=24659511 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qh_7_scaffold_1048_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3693..4613
DNA (921bp) protein (307aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9H1_SALRM
Suspect SCG annotation. See neighboring gene [qh_7_scaffold_1048_7].
metG; methionyl-tRNA synthetase
qh_7_scaffold_1048_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4561..5751
DNA (1191bp) protein (397aa)
metG; methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] id=24659510 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Methionine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000255|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00098}; Short=MetRS {ECO:0000255|HAMAP-R
metG; methionyl-tRNA synthetase
qh_7_scaffold_1048_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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5961..6683
DNA (723bp) protein (241aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {E
MTA/SAH nucleosidase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2A4_SALRD
mtnN; MTA/SAH nucleosidase
qh_7_scaffold_1048_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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6799..8253
DNA (1455bp) protein (485aa)
hemA; glutamyl-tRNA reductase; K02492 glutamyl-tRNA reductase [EC:1.2.1.70] id=24659507 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glutamyl-tRNA reductase {ECO:0000255|HAMAP-Rule:MF_00087}; Short=GluTR {ECO:0000255|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000255|HAMAP-Rule:MF_00087};; TaxID=309807 species="Bacteria; Bacteroidetes
hemA; glutamyl-tRNA reductase
qh_7_scaffold_1048_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8355..9341
DNA (987bp) protein (329aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260, ECO:0000313|EMBL:CBH24673.1}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260, ECO:0000313|EMBL:C
Porphobilinogen deaminase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9G8_SALRM
hemC; porphobilinogen deaminase
qh_7_scaffold_1048_11
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9417..9899)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8E9V9_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EMT52290.1}; TaxID=1300222 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus borstelensis AK1.;"
hypothetical protein
qh_7_scaffold_1048_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9914..10837
DNA (924bp) protein (308aa)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:CBH24672.1}; EC=4.2.1.75 {ECO:0000313|EMBL:CBH24672.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
Uroporphyrinogen-III synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9G7_SALRM
hemD; uroporphyrinogen-III synthase
qh_7_scaffold_1048_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10849..11532)
DNA (684bp) protein (228aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
Thiamine-phosphate synthase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=THIE_SALRD
thiE; Thiamine monophosphate synthase
qh_7_scaffold_1048_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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12020..13114
DNA (1095bp) protein (365aa)
hydroxypyruvate reductase; K00050 hydroxypyruvate reductase [EC:1.1.1.81] id=24659502 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hydroxypyruvate reductase
Hydroxypyruvate reductase {ECO:0000313|EMBL:ABC46324.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qh_7_scaffold_1048_15
unknown

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comp(13481..14173)
DNA (693bp) protein (231aa)

This feature has no annotations

qh_7_scaffold_1048_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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14543..15523
DNA (981bp) protein (327aa)
hypothetical protein
zinc-dependent carboxypeptidase domain-containing protein id=24659501 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24668.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_1048_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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15528..16010
DNA (483bp) protein (161aa)
hypothetical protein
zinc-dependent carboxypeptidase domain-containing protein id=24659501 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24668.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying 17 items

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