ggKbase home page

qh_7_scaffold_1960

Search features with annotation key words

Displaying 14 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_1960_1
Halomonas sp. S2151, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29..1060)
DNA (1032bp) protein (344aa)
sodium:calcium antiporter n=1 Tax=Halomonas smyrnensis RepID=UPI000368CF20
Sodium:calcium antiporter {ECO:0000313|EMBL:KJZ15053.1}; TaxID=579478 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. S215
Na+/Ca2+-exchanging protein
qh_7_scaffold_1960_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1419..2300
DNA (882bp) protein (294aa)
Pantothenate synthetase {ECO:0000255|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000255|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000255|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000255|HAMAP-
Pantothenate synthetase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=PANC_SALRD
panC; pantoate--beta-alanine ligase
qh_7_scaffold_1960_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2347..2949
DNA (603bp) protein (201aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase
Aspartate 1-decarboxylase n=2 Tax=Salinibacter ruber RepID=PAND_SALRD
panD; aspartate 1-decarboxylase
qh_7_scaffold_1960_4
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(2946..3836)
DNA (891bp) protein (297aa)
hypothetical protein id=5026843 bin=GWA2_Ignavibacteria_55_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
qh_7_scaffold_1960_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4240..5094
DNA (855bp) protein (285aa)
3-hydroxybutyryl-CoA dehydrogenase; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] id=24659363 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ABC45405.1}; EC=1.1.1.157 {ECO:0000313|EMBL:ABC45405.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rh
3-hydroxybutyryl-CoA dehydrogenase
qh_7_scaffold_1960_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5221..6180)
DNA (960bp) protein (320aa)
PhoH family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2P3_SALRD
PhoH family protein
PhoH family protein {ECO:0000313|EMBL:ABC43690.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
qh_7_scaffold_1960_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6314..7153
DNA (840bp) protein (280aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
Diaminopimelate epimerase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H923_SALRM
dapF; diaminopimelate epimerase
qh_7_scaffold_1960_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7202..7708)
DNA (507bp) protein (169aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148, ECO:0000313|EMBL:CBH24529.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order I
Peptidylprolyl cis-trans isomerase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2P1_SALRD
ppiD; peptidyl-prolyl cis-trans isomerase D
qh_7_scaffold_1960_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7710..9146)
DNA (1437bp) protein (479aa)
peptidyl-prolyl cis-trans isomerase; K01802 peptidylprolyl isomerase [EC:5.2.1.8] id=24659366 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
peptidyl-prolyl cis-trans isomerase
qh_7_scaffold_1960_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9416..10342
DNA (927bp) protein (309aa)
hypothetical protein
hypothetical protein; K09933 hypothetical protein id=24659367 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24530.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_1960_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10335..11576)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H926_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24531.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_1960_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(11880..12140)
DNA (261bp) protein (87aa)
rpmA; 50S ribosomal protein L27
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 id=24659369 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539, ECO:0000313|EMBL:CBH24532.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qh_7_scaffold_1960_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(12192..12662)
DNA (471bp) protein (157aa)
50S ribosomal protein L21 n=2 Tax=Salinibacter ruber RepID=RL21_SALRD
rplU; 50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000255|HAMAP-Rule:MF_01363}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_7_scaffold_1960_14
unknown

Not on your lists

comp(12755..13066)
DNA (312bp) protein (104aa)

This feature has no annotations

Displaying 14 items

View Taxonomy