ggKbase home page

qh_7_scaffold_243

Search features with annotation key words

Displaying 29 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_243_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2..190)
DNA (189bp) protein (63aa)
hypothetical protein
hypothetical protein id=24658467 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC46279.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_243_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

508..1638
DNA (1131bp) protein (377aa)
tRNA-dihydrouridine synthase B {ECO:0000313|EMBL:CBH25662.1}; EC=1.-.-.- {ECO:0000313|EMBL:CBH25662.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
tRNA-dihydrouridine synthase B n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCA7_SALRM
dusB; tRNA-dihydrouridine synthase B
qh_7_scaffold_243_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1804..2244
DNA (441bp) protein (147aa)
hypothetical protein
hypothetical protein id=24658453 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25647.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_243_4
unknown

Not on your lists

2362..2568
DNA (207bp) protein (69aa)

This feature has no annotations

qh_7_scaffold_243_5
GWF2_Melainabacteria_37_15_curated, Melainabacteria, Bacteria

Not on your lists

2629..2940
DNA (312bp) protein (104aa)
Putative uncharacterized protein id=3523688 bin=GWF2_Melainabacteria_37_15 species=Methanoplanus limicola genus=Methanoplanus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
hypothetical protein Tax=GWF2_Melainabacteria_37_15_curated
hypothetical protein
qh_7_scaffold_243_6
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2937..3164
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B38BA0
Uncharacterized protein {ECO:0000313|EMBL:KHD08110.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
hypothetical protein
qh_7_scaffold_243_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3245..3733
DNA (489bp) protein (163aa)
hypothetical protein
hypothetical protein id=24658452 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC46188.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_243_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3724..5169)
DNA (1446bp) protein (482aa)
hypothetical protein
hypothetical protein id=24658451 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein family (UPF0089) {ECO:0000313|EMBL:ABC46165.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
qh_7_scaffold_243_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5488..6705)
DNA (1218bp) protein (406aa)
hypothetical protein
hypothetical protein id=24658450 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45354.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_243_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6846..7778)
DNA (933bp) protein (311aa)
hypothetical protein
hypothetical protein id=24658449 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25640.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_243_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7829..8605)
DNA (777bp) protein (259aa)
ABC transporter, ATP-binding protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZN1_SALRD
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ABC45736.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qh_7_scaffold_243_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8794..9546)
DNA (753bp) protein (251aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HC83_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25638.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_243_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9708..11087
DNA (1380bp) protein (460aa)
DNA repair protein radA n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZN3_SALRD
radA; DNA repair protein RadA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qh_7_scaffold_243_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11381..11515
DNA (135bp) protein (45aa)
RNA polymerase sigma-70 factor, ECF subfamily n=2 Tax=Salinibacter ruber RepID=Q2RZN4_SALRD
rpoE; RNA polymerase sigma-E factor
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:ABC44806.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sou
qh_7_scaffold_243_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11512..11883
DNA (372bp) protein (124aa)
rpoE; RNA polymerase sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=24658445 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
rpoE; RNA polymerase sigma-E factor
RNA polymerase sigma-E factor {ECO:0000313|EMBL:CBH25636.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_7_scaffold_243_16
Salinibacter_ruber, Salinibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11934..12500
DNA (567bp) protein (189aa)
id=24658444 bin=Salinibacter_ruber tax=Salinibacter_ruber
id=24658444 bin=Salinibacter_ruber tax=Salinibacter_ruber
qh_7_scaffold_243_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12567..13304
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZN5_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC46159.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_243_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13477..14763
DNA (1287bp) protein (429aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CBH25634.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CBH25634.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HC79_SALRM
amiB; N-acetylmuramoyl-L-alanine amidase
qh_7_scaffold_243_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14860..15408
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HC78_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25633.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_243_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15627..16025)
DNA (399bp) protein (133aa)
translation initiation inhibitor containig endoribonuclease L-PSP
endoribonuclease L-PSP id=24658440 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative translation initiation inhibitor containig endoribonuclease L-PSP {ECO:0000313|EMBL:CBH25632.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodoth
qh_7_scaffold_243_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16235..17383
DNA (1149bp) protein (383aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sed
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HC76_SALRM
trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1
qh_7_scaffold_243_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17607..19049
DNA (1443bp) protein (481aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] id=24658438 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
hypothetical protein
qh_7_scaffold_243_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19332..20069
DNA (738bp) protein (246aa)
PhoP3 response regulator
PhoP3 response regulator id=24658437 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
PhoP3 response regulator {ECO:0000313|EMBL:ABC44000.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qh_7_scaffold_243_24
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20100..21488
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037CCAE5
phosphatase
Phosphatase {ECO:0000313|EMBL:AKD03685.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
qh_7_scaffold_243_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21756..22472)
DNA (717bp) protein (239aa)
drrA; response regulator DrrA
drrA; response regulator DrrA id=24658436 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Response regulator DrrA {ECO:0000313|EMBL:CBH25628.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_243_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23139..24209
DNA (1071bp) protein (357aa)
Endoglucanase, putative n=2 Tax=Salinibacter ruber RepID=D5HC72_SALRM
frvX; endoglucanase
Endoglucanase, putative {ECO:0000313|EMBL:CBH25627.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_243_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24465..25823)
DNA (1359bp) protein (453aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:CBH25626.1}; EC=2.5.1.54 {ECO:0000313|EMBL:CBH25626.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HC71_SALRM
aroH; phospho-2-dehydro-3-deoxyheptonate aldolase
qh_7_scaffold_243_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26019..26747
DNA (729bp) protein (243aa)
drrA; response regulator DrrA id=24658433 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
drrA; response regulator DrrA
Response regulator DrrA {ECO:0000313|EMBL:CBH25625.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_243_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26892..28097
DNA (1206bp) protein (402aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Sensor histidine kinase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HC69_SALRM
sensor histidine kinase
Displaying 29 items

View Taxonomy