ggKbase home page

qh_7_scaffold_67

Search features with annotation key words

Displaying items 1-30 of 66 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_67_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1..318
DNA (318bp) protein (106aa)
Na+/proline symporter n=2 Tax=Salinibacter ruber RepID=D5HAV0_SALRM
putP; Na+/proline symporter
Uncharacterized protein {ECO:0000313|EMBL:ABC45571.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_67_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

372..1463
DNA (1092bp) protein (364aa)
Fructose-1,6-bisphosphatase class 1 2 {ECO:0000255|HAMAP-Rule:MF_01855}; Short=FBPase class 1 2 {ECO:0000255|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000255|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisph
Fructose-1,6-bisphosphatase class 1 2 n=2 Tax=Salinibacter ruber RepID=F16A2_SALRD
fbp; fructose-1,6-bisphosphatase
qh_7_scaffold_67_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1572..2849)
DNA (1278bp) protein (426aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176, ECO:0000313|EMBL:CBH24984.1};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(
Serine--tRNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC9_SALRM
serS; seryl-tRNA synthetase
qh_7_scaffold_67_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3056..3964)
DNA (909bp) protein (303aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CBH24983.1}; EC=1.1.1.133 {ECO:0000313|EMBL:CBH24983.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhod
dTDP-4-dehydrorhamnose reductase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC8_SALRM
rfbD; dTDP-4-dehydrorhamnose reductase
qh_7_scaffold_67_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4007..4516)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24982.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_67_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4578..5858)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC5_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24980.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_67_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5908..7791)
DNA (1884bp) protein (628aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC4_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24979.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_67_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7946..9148
DNA (1203bp) protein (401aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC3_SALRM
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase
qh_7_scaffold_67_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9226..10668
DNA (1443bp) protein (481aa)
Membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] id=24659806 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermace
membrane-associated zinc metalloprotease
qh_7_scaffold_67_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10891..11715
DNA (825bp) protein (275aa)
uppS; undecaprenyl diphosphate synthase; K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] id=24659805 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
uppS; undecaprenyl diphosphate synthase
qh_7_scaffold_67_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11951..14488
DNA (2538bp) protein (846aa)
Surface antigen (D15): Surface antigen variable number n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC0_SALRM
Surface antigen (D15): Surface antigen variable number {ECO:0000313|EMBL:CBH24975.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibact
Surface antigen
qh_7_scaffold_67_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14529..15161
DNA (633bp) protein (211aa)
Outer membrane protein OmpH, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1H4_SALRD
outer membrane protein OmpH
Outer membrane protein OmpH, putative {ECO:0000313|EMBL:ABC44454.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sal
qh_7_scaffold_67_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15239..15838
DNA (600bp) protein (200aa)
outer membrane lipoprotein
outer membrane lipoprotein id=24659802 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Outer membrane protein (OmpH-like) {ECO:0000313|EMBL:ABC44759.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
qh_7_scaffold_67_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15934..16767
DNA (834bp) protein (278aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAB7_SALRM
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase
qh_7_scaffold_67_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17274..19073
DNA (1800bp) protein (600aa)
Choline dehydrogenase {ECO:0000313|EMBL:CBH25669.1}; EC=1.1.99.1 {ECO:0000313|EMBL:CBH25669.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Choline dehydrogenase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCB4_SALRM
beta; choline dehydrogenase
qh_7_scaffold_67_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19096..19794
DNA (699bp) protein (233aa)
Tat pathway signal sequence domain-containing protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH69_RHOM4
Tat pathway signal sequence domain-containing protein
Tat pathway signal sequence domain-containing protein {ECO:0000313|EMBL:ACY49658.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
qh_7_scaffold_67_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20847..21266
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1H8_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45563.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_67_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21468..22496)
DNA (1029bp) protein (343aa)
Transporter, small conductance mechanosensitive ion channel (MscS) family n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAB4_SALRM
transporter, small conductance mechanosensitive ion channel (MscS) family
Transporter, small conductance mechanosensitive ion channel (MscS) family {ECO:0000313|EMBL:CBH24969.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
qh_7_scaffold_67_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22535..23434)
DNA (900bp) protein (300aa)
FolD bifunctional protein; K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] id=24659797 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Bifunctional protein FolD {ECO:0000255|HAMAP-Rule:MF_01576}; Includes:; Methylenetetrahydrofolate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01576}; EC=1.5.1.5 {ECO:0000255|HAMAP-Rule:MF_01576};; Includ
FolD bifunctional protein
qh_7_scaffold_67_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23682..24767
DNA (1086bp) protein (362aa)
asd; aspartate-semialdehyde dehydrogenase; K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] id=24659796 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ABC46049.1}; EC=1.2.1.11 {ECO:0000313|EMBL:ABC46049.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; R
asd; aspartate-semialdehyde dehydrogenase
qh_7_scaffold_67_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24839..25360
DNA (522bp) protein (174aa)
hypothetical protein
hypothetical protein id=24659795 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24966.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_67_trna_1
unknown

Not on your lists

25431..25503
DNA (73bp)
transferRNA
qh_7_scaffold_67_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25702..26793)
DNA (1092bp) protein (364aa)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAB0_SALRM
pckA; phosphoenolpyruvate carboxykinase
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:00
qh_7_scaffold_67_23
unknown

Not on your lists

26901..27341
DNA (441bp) protein (147aa)

This feature has no annotations

qh_7_scaffold_67_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27560..28423
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1I5_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC46010.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_67_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28546..30069
DNA (1524bp) protein (508aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {EC
Asparaginyl-tRNA synthetase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1I6_SALRD
asnS; asparaginyl-tRNA synthetase
qh_7_scaffold_67_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

30169..30918
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1I7_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45419.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_67_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30899..31651)
DNA (753bp) protein (251aa)
Lysophospholipase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAA6_SALRM
lysophospholipase
Lysophospholipase {ECO:0000313|EMBL:ABC46040.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (str
qh_7_scaffold_67_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

32018..32281
DNA (264bp) protein (88aa)
hypothetical protein
hypothetical protein id=24659788 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24960.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_67_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

32449..34410
DNA (1962bp) protein (654aa)
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD id=24659787 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
secD; protein-export membrane protein secD
Displaying items 1-30 of 66 in total

View Taxonomy