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qh_7_scaffold_112

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_112_1
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(1..231)
DNA (231bp) protein (77aa)
D-tyrosyl-tRNA(Tyr) deacylase; K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-] Tax=RBG_16_Chloroflexi_57_9_curated
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Salisaeta longa RepID=UPI0003B5A642
D-tyrosyl-tRNA(Tyr) deacylase
qh_7_scaffold_112_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(325..945)
DNA (621bp) protein (207aa)
nucleoside-triphosphatase rdgB (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard p
Non-canonical purine NTP pyrophosphatase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SKW7_RHOMR
qh_7_scaffold_112_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1100..1309
DNA (210bp) protein (70aa)
30S ribosomal protein S21 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8C1_SALRM
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qh_7_scaffold_112_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1346..5209)
DNA (3864bp) protein (1288aa)
2-oxoglutarate dehydrogenase, E1 component {ECO:0000313|EMBL:ABC45112.1}; EC=1.2.4.2 {ECO:0000313|EMBL:ABC45112.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sed
2-oxoglutarate dehydrogenase, E1 component n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3D2_SALRD
kgd; alpha-ketoglutarate decarboxylase
qh_7_scaffold_112_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5406..6368)
DNA (963bp) protein (321aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8C4_SALRM
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:CBH24279.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
qh_7_scaffold_112_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6612..8066)
DNA (1455bp) protein (485aa)
RNA methyltransferase, TrmA family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFU4_RHOM4
TrmA family RNA methyltransferase
RNA methyltransferase, TrmA family {ECO:0000313|EMBL:ACY49433.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodot
qh_7_scaffold_112_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8103..8708)
DNA (606bp) protein (202aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFU3_RHOM4
Crp/Fnr family transcriptional regulator
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ACY49432.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;
qh_7_scaffold_112_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8840..11404)
DNA (2565bp) protein (855aa)
Surface antigen (D15) n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIH9_RHOMR
surface antigen (D15)
Surface antigen (D15) {ECO:0000313|EMBL:AEN74455.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinu
qh_7_scaffold_112_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11579..12565)
DNA (987bp) protein (329aa)
peptidase
peptidase id=24658109 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative peptidase {ECO:0000313|EMBL:CBH25310.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
qh_7_scaffold_112_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13026..14063)
DNA (1038bp) protein (346aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SA
HPr kinase/phosphorylase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBA6_SALRM
hprK; HPr kinase/phosphorylase
qh_7_scaffold_112_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14172..15167)
DNA (996bp) protein (332aa)
ATPase family associated with various cellular activities (AAA), putative n=2 Tax=Salinibacter ruber RepID=D5HBA7_SALRM
ATPase
ATPase family associated with various cellular activities (AAA), putative {ECO:0000313|EMBL:CBH25312.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
qh_7_scaffold_112_12
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15301..16311)
DNA (1011bp) protein (337aa)
Small-conductance mechanosensitive channel n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NJQ0_9BACT
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:EMR02025.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribact
mechanosensitive ion channel protein MscS
qh_7_scaffold_112_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16498..17436)
DNA (939bp) protein (313aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=309807 species="B
Methionyl-tRNA formyltransferase n=2 Tax=Salinibacter ruber RepID=D5HBA8_SALRM
fmt; methionyl-tRNA formyltransferase
qh_7_scaffold_112_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17663..18715)
DNA (1053bp) protein (351aa)
ftsY; signal recognition particle GTPase
ftsY; signal recognition particle GTPase; K03110 fused signal recognition particle receptor id=24658113 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order I
qh_7_scaffold_112_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18761..19567)
DNA (807bp) protein (269aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] id=24658114 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Putative phosphatidylglycerophosphate synthase {ECO:0000313|EMBL:ABC44421.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" so
qh_7_scaffold_112_16
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

19811..21001
DNA (1191bp) protein (397aa)
glycosyl transferase family 2 n=1 Tax=Salisaeta longa RepID=UPI0003B61BB5
family 2 glycosyl transferase Tax=GWA2_Ignavibacteria_54_16_curated
hypothetical protein
qh_7_scaffold_112_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21208..22494
DNA (1287bp) protein (429aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. In
Citrate synthase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDV9_RHOM4
citrate synthase I
qh_7_scaffold_112_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22883..23854
DNA (972bp) protein (324aa)
PhoH family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2P3_SALRD
PhoH family protein
PhoH family protein {ECO:0000313|EMBL:ABC43690.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
qh_7_scaffold_112_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24052..24342)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B4D706
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24656.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_112_20
unknown

Not on your lists

comp(24566..24793)
DNA (228bp) protein (76aa)

This feature has no annotations

qh_7_scaffold_112_trna_1
unknown

Not on your lists

comp(24651..24740)
DNA (90bp)
transferRNA
qh_7_scaffold_112_21
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(25089..27998)
DNA (2910bp) protein (970aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
Alanine--tRNA ligase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIY9_RHOM4
alanyl-tRNA synthetase
qh_7_scaffold_112_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28694..30760
DNA (2067bp) protein (689aa)
Two-component system sensor histidine kinase/response regulator, hybrid ('one co) n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4S9_SALRM
two-component system sensor histidine kinase/response regulator, hybrid
Two-component system sensor histidine kinase/response regulator, hybrid ('one co) {ECO:0000313|EMBL:CBH23034.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
qh_7_scaffold_112_23
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(30774..31166)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI000366057A
HEPN domain-containing protein Tax=RBG_16_RIF_WS3X_71_46_curated
HEPN domain-containing protein
qh_7_scaffold_112_24
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(31168..31500)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI000319D0A4
DNA polymerase beta domain-containing protein region Tax=RBG_13_Planctomycetes_60_9_curated
qh_7_scaffold_112_25
unknown

Not on your lists

31505..31771
DNA (267bp) protein (89aa)

This feature has no annotations

Displaying 26 items

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