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qh_7_scaffold_349

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_349_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2..694
DNA (693bp) protein (231aa)
mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] id=24656873 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=761659 species="Bacteria; Ba
mfd; transcription-repair coupling factor
qh_7_scaffold_349_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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945..1184
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B69DBB
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
qh_7_scaffold_349_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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1218..1706
DNA (489bp) protein (163aa)
DNA-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B2EE86
nucleic acid-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
nucleic acid-binding protein, contains PIN domain
qh_7_scaffold_349_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2097..2882
DNA (786bp) protein (262aa)
DNA repair protein RadC n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBS6_SALRM
radC; DNA repair protein RadC
DNA repair protein RadC {ECO:0000313|EMBL:CBH25481.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_349_5
unknown

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comp(2914..4047)
DNA (1134bp) protein (378aa)

This feature has no annotations

qh_7_scaffold_349_6
unknown

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comp(4164..4595)
DNA (432bp) protein (144aa)

This feature has no annotations

qh_7_scaffold_349_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4893..6329
DNA (1437bp) protein (479aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:000025
Glycine--tRNA ligase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S046_SALRD
glyS; glycyl-tRNA synthetase
qh_7_scaffold_349_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6400..8106)
DNA (1707bp) protein (569aa)
metallopeptidase
pepN; metallopeptidase id=24657818 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative metallopeptidase {ECO:0000313|EMBL:ABC45960.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qh_7_scaffold_349_9
unknown

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8265..8528
DNA (264bp) protein (88aa)

This feature has no annotations

qh_7_scaffold_349_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(8718..10025)
DNA (1308bp) protein (436aa)
GTP-binding protein Der n=1 Tax=Salisaeta longa RepID=UPI0003B2F5CD
small GTP-binding protein
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Or
qh_7_scaffold_349_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10210..11025)
DNA (816bp) protein (272aa)
ABC transporter substrate-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B79D98
ABC transporter substrate-binding protein
Putative ABC transporter (Substrate-binding protein) {ECO:0000313|EMBL:CBH23338.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter
qh_7_scaffold_349_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(11171..11974)
DNA (804bp) protein (268aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphat
Undecaprenyl-diphosphatase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG17_RHOM4
UDP-diphosphatase
qh_7_scaffold_349_13
unknown

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comp(12134..12499)
DNA (366bp) protein (122aa)

This feature has no annotations

qh_7_scaffold_349_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12843..14402)
DNA (1560bp) protein (520aa)
ABC transporter ATP-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B41BD2
msbA; Lipid A export ATP-binding/permease protein msbA
Lipid A export ATP-binding/permease protein msbA {ECO:0000313|EMBL:CBH25974.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;"
Displaying 14 items

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