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qh_7_scaffold_298

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_298_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1..1143
DNA (1143bp) protein (381aa)
hypothetical protein
hypothetical protein id=24658050 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC43586.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_298_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1402..2163
DNA (762bp) protein (254aa)
hypothetical protein
hypothetical protein; K07164 id=24658051 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized ACR, superfamily {ECO:0000313|EMBL:ABC44344.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
qh_7_scaffold_298_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3227..3646)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S0R1_SALRD
protein-export membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44705.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_298_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3740..4351)
DNA (612bp) protein (204aa)
NUDIX hydrolase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEV0_RHOMR
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEN72868.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.
qh_7_scaffold_298_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4418..5146)
DNA (729bp) protein (243aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. I
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEV2_RHOMR
ribosomal RNA small subunit methyltransferase E
qh_7_scaffold_298_trna_1
unknown

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5392..5463
DNA (72bp)
transferRNA
qh_7_scaffold_298_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6041..6409
DNA (369bp) protein (123aa)
Uncharacterized conserved membrane protein n=2 Tax=Salinibacter ruber RepID=Q2S2N1_SALRD
hypothetical protein
Uncharacterized conserved membrane protein {ECO:0000313|EMBL:ABC44849.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
qh_7_scaffold_298_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6601..7266
DNA (666bp) protein (222aa)
ribonuclease H (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
Ribonuclease HII n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIA9_RHOMR
qh_7_scaffold_298_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7527..8102)
DNA (576bp) protein (192aa)
shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroi
Shikimate kinase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFA7_RHOM4
qh_7_scaffold_298_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8154..8951
DNA (798bp) protein (266aa)
tRNA pseudouridine synthase A {ECO:0000255|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000255|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=TRUA_SALRD
truA; tRNA pseudouridine synthase A
qh_7_scaffold_298_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9273..10025
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HC01_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25556.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_298_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10085..11134
DNA (1050bp) protein (350aa)
Transcriptional regulator, LacI family n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGB3_RHOMR
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AEN73314.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rh
qh_7_scaffold_298_12
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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comp(11178..12269)
DNA (1092bp) protein (364aa)
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase I {ECO:0000313|EMBL:AGY59939.1}; EC=5.99.1.2 {ECO:0000313|EMBL:AGY59939.1};; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gl
DNA topoisomerase I n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QQP3_9CYAN
qh_7_scaffold_298_13
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12348..13166)
DNA (819bp) protein (273aa)
Oxidoreductase aldo/keto reductase family n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JY12_9BACT
Oxidoreductase aldo/keto reductase family {ECO:0000313|EMBL:ELR73063.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga im
aldo/keto reductase
qh_7_scaffold_298_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13525..14007
DNA (483bp) protein (161aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=761659 specie
peptidase n=1 Tax=Salisaeta longa RepID=UPI0003B662E8
ATP-dependent protease peptidase subunit
qh_7_scaffold_298_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14090..15082
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B5B168
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45106.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_298_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15248..16603
DNA (1356bp) protein (452aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S217_SALRD
hslU; ATP-dependent protease ATP-binding subunit HslU
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=309807 species="Bacteria; Bacteroid
qh_7_scaffold_298_17
unknown

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16681..16833
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying 18 items

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