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qh_7_scaffold_226

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_226_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1..630
DNA (630bp) protein (210aa)
Probable transposase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6S7_SALRM
transposase
Probable transposase {ECO:0000313|EMBL:CBH23732.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (
qh_7_scaffold_226_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

717..2171
DNA (1455bp) protein (485aa)
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; R
pyruvate kinase n=1 Tax=Salisaeta longa RepID=UPI0003B6E51C
qh_7_scaffold_226_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2335..5043
DNA (2709bp) protein (903aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B4BD72
hypothetical protein
Tetratricopeptide TPR_4 {ECO:0000313|EMBL:AEN73950.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qh_7_scaffold_226_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5349..7616
DNA (2268bp) protein (756aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
ATPase AAA n=1 Tax=Salisaeta longa RepID=UPI0003B3A6FB
qh_7_scaffold_226_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


7588..8154
DNA (567bp) protein (189aa)
30S ribosomal protein S12 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7Z6_SALRM
rpsL; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qh_7_scaffold_226_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


8216..8728
DNA (513bp) protein (171aa)
30S ribosomal protein S7 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGV0_RHOM4
30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qh_7_scaffold_226_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8843..10012
DNA (1170bp) protein (390aa)
elongation factor P n=1 Tax=Salisaeta longa RepID=UPI0003B6E354
fusA; translation elongation factor G (EF-G)
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
qh_7_scaffold_226_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9975..10868
DNA (894bp) protein (298aa)
elongation factor P n=1 Tax=Salisaeta longa RepID=UPI0003B6E354
translation elongation factor G
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
qh_7_scaffold_226_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11000..12388
DNA (1389bp) protein (463aa)
elongation factor Tu n=1 Tax=Salisaeta longa RepID=UPI0003B38A18
tuf; elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Orde
qh_7_scaffold_226_trna_1
unknown

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12236..12308
DNA (73bp)
transferRNA
qh_7_scaffold_226_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12363..12554
DNA (192bp) protein (64aa)
Protein translocase subunit SecE n=2 Tax=Rhodothermus marinus RepID=D0MHN5_RHOM4
preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhod
qh_7_scaffold_226_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12595..13248
DNA (654bp) protein (218aa)
Transcription termination/antitermination protein NusG n=2 Tax=Rhodothermus marinus RepID=D0MHN6_RHOM4
NusG antitermination factor
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
qh_7_scaffold_226_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


13357..13797
DNA (441bp) protein (147aa)
50S ribosomal protein L11 n=1 Tax=Salisaeta longa RepID=UPI0003B6EAF6
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000255|HAMAP-Rule:MF_00736}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_7_scaffold_226_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


13910..14620
DNA (711bp) protein (237aa)
rplA; 50S ribosomal protein L1
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 id=24659723 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318, ECO:0000313|EMBL:CBH24895.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
qh_7_scaffold_226_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


14839..15246
DNA (408bp) protein (136aa)
50S ribosomal protein L10 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHN9_RHOM4
50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhod
qh_7_scaffold_226_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15414..15797
DNA (384bp) protein (128aa)
50S ribosomal protein L7 n=1 Tax=Salisaeta longa RepID=UPI0003B68B4F
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000255|HAMAP-Rule:MF_00368}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
qh_7_scaffold_226_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16202..20131
DNA (3930bp) protein (1310aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CB
DNA-directed RNA polymerase subunit beta n=2 Tax=Salinibacter ruber RepID=RPOB_SALRD
rpoB; DNA-directed RNA polymerase subunit beta
qh_7_scaffold_226_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20286..24665
DNA (4380bp) protein (1460aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Salisaeta longa RepID=UPI0003B65FF5
rpoC; DNA-directed RNA polymerase subunit beta'
qh_7_scaffold_226_18
unknown

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comp(24836..25063)
DNA (228bp) protein (76aa)

This feature has no annotations

qh_7_scaffold_226_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25292..25948
DNA (657bp) protein (219aa)
TetR family transcriptional regulator n=1 Tax=Salisaeta longa RepID=UPI0003B37D4A
ttgR; TtgR family transcriptional regulator
HTH-type transcriptional regulator ttgR {ECO:0000313|EMBL:CBH24317.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
qh_7_scaffold_226_20
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25985..27904
DNA (1920bp) protein (640aa)
AMP-dependent synthetase and ligase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJD6_RHOM4
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACY48594.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodo
qh_7_scaffold_226_21
Halomonas elongata, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28072..28866)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) RepID=E1V545_HALED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBV41094.1}; TaxID=768066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas elongata (
qh_7_scaffold_226_22
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

29058..30227
DNA (1170bp) protein (390aa)
xylose isomerase (EC:5.3.1.5)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=357808 species="Bacteria; Chlorof
Xylose isomerase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UX99_ROSS1
qh_7_scaffold_226_23
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

30286..31776
DNA (1491bp) protein (497aa)
xylB; xylulose kinase (EC:2.7.1.17)
Xylulose kinase {ECO:0000313|EMBL:BAJ64517.1}; EC=2.7.1.17 {ECO:0000313|EMBL:BAJ64517.1};; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" so
Xylulose kinase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZG9_ANATU
Displaying 24 items

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