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qh_7_scaffold_1122

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_1122_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(459..2288)
DNA (1830bp) protein (610aa)
response regulator receiver domain-containing protein
response regulator receiver domain-containing protein id=24657710 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Response regulator receiver domain protein {ECO:0000313|EMBL:ABC45812.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
qh_7_scaffold_1122_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2930..6178)
DNA (3249bp) protein (1083aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
PAS/PAC/histidine kinase protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7D3_SALRM
PAS/PAC/histidine kinase protein
qh_7_scaffold_1122_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(6516..8195)
DNA (1680bp) protein (560aa)
acrB; AcrB/AcrD/AcrF family multidrug efflux transporter
Multidrug efflux transporter, AcrB/AcrD/AcrF family {ECO:0000313|EMBL:CBH23474.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.
acrB; AcrB/AcrD/AcrF family multidrug efflux transporter id=24657325 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qh_7_scaffold_1122_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(8213..9748)
DNA (1536bp) protein (512aa)
acrB; AcrB/AcrD/AcrF family multidrug efflux transporter
acrB; AcrB/AcrD/AcrF family multidrug efflux transporter id=24657325 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Multidrug efflux transporter, AcrB/AcrD/AcrF family {ECO:0000313|EMBL:CBH23474.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.
qh_7_scaffold_1122_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(9796..10224)
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H620_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC43748.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_1122_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(10341..11582)
DNA (1242bp) protein (414aa)
acrA; Efflux transporter, RND family, MFP subunit
acrA; Efflux transporter, RND family, MFP subunit id=24657327 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:CBH23476.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sourc
qh_7_scaffold_1122_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(11636..13126)
DNA (1491bp) protein (497aa)
Efflux pump outer membrane protein n=2 Tax=Salinibacter ruber RepID=D5H622_SALRM
sepC; efflux pump outer membrane protein
Efflux pump outer membrane protein {ECO:0000313|EMBL:CBH23477.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
qh_7_scaffold_1122_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13161..13799)
DNA (639bp) protein (213aa)
Transcriptional regulator, TetR family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S5A9_SALRD
acrR; TetR family transcriptional regulator
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:CBH23478.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" so
qh_7_scaffold_1122_9
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14117..14827)
DNA (711bp) protein (237aa)
intI; integrase/recombinase Tax=RBG_16_Betaproteobacteria_64_18_curated
qh_7_scaffold_1122_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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15491..15943
DNA (453bp) protein (151aa)
cyclophilin type peptidyl-prolyl cis-trans isomerase; K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] id=24657330 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493, ECO:0000313|EMBL:CBH23479.1}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493, ECO:0000313|EMBL:CBH23479.1};; TaxID=761659 species="Bacter
rot; peptidyl-prolyl cis-trans isomerase
qh_7_scaffold_1122_11
unknown

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15961..16224
DNA (264bp) protein (88aa)

This feature has no annotations

qh_7_scaffold_1122_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16328..17977
DNA (1650bp) protein (550aa)
Probable RNA-biniding protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5J8_SALRM
RNA-biniding protein
Probable RNA-biniding protein {ECO:0000313|EMBL:CBH23303.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_7_scaffold_1122_13
unknown

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18267..18545
DNA (279bp) protein (93aa)

This feature has no annotations

qh_7_scaffold_1122_14
unknown

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18542..18682
DNA (141bp) protein (47aa)

This feature has no annotations

qh_7_scaffold_1122_15
unknown

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comp(18737..19267)
DNA (531bp) protein (177aa)

This feature has no annotations

Displaying 15 items

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