ggKbase home page

qh_7_scaffold_435

Search features with annotation key words

Displaying 28 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_435_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(55..810)
DNA (756bp) protein (252aa)
ABC transporter ATP-binding protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HC57_SALRM
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CBH25612.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
qh_7_scaffold_435_trna_1
unknown

Not on your lists

999..1071
DNA (73bp)
transferRNA
qh_7_scaffold_435_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1116..1385)
DNA (270bp) protein (90aa)
hypothetical protein
hypothetical protein id=24658417 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44237.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_435_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1413..1841)
DNA (429bp) protein (143aa)
hypothetical protein
hypothetical protein id=24658416 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44327.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_435_4
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

2176..2646
DNA (471bp) protein (157aa)
Nuclease inhibitor n=1 Tax=Pedobacter sp. BAL39 RepID=A6EHX6_9SPHI
hypothetical protein
Tax=BJP_IG2102_Ignavibacteriales_35_8
qh_7_scaffold_435_5
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2710..3645
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=cyanobacterium PCC 7702 RepID=UPI00037A5566
ATP/GTP-binding protein Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
ATP/GTP-binding protein
qh_7_scaffold_435_6
unknown

Not on your lists

comp(3710..4252)
DNA (543bp) protein (181aa)

This feature has no annotations

qh_7_scaffold_435_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4694..5092)
DNA (399bp) protein (133aa)
hypothetical protein id=24657280 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23428.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_435_8
unknown

Not on your lists

comp(5135..5425)
DNA (291bp) protein (97aa)

This feature has no annotations

qh_7_scaffold_435_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5595..6155)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4B5_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44292.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_435_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6182..6514)
DNA (333bp) protein (111aa)
SPFH domain / Band 7 family protein n=2 Tax=Salinibacter ruber RepID=Q2S1U3_SALRD
HflC; stomatin-like transmembrane protein
SPFH domain / Band 7 family protein {ECO:0000313|EMBL:ABC44202.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
qh_7_scaffold_435_11
unknown

Not on your lists

comp(6511..6678)
DNA (168bp) protein (56aa)

This feature has no annotations

qh_7_scaffold_435_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6775..8517)
DNA (1743bp) protein (581aa)
FAD binding domain-containing protein; K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] id=24658390 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
FAD binding domain-containing protein
FAD binding domain protein {ECO:0000313|EMBL:ABC46107.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
qh_7_scaffold_435_13
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8881..9414
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AI57_IGNAJ
hypothetical protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
hypothetical protein
qh_7_scaffold_435_14
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

9471..10133
DNA (663bp) protein (221aa)
Putative membrane protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EG64_9CHLR
Putative membrane protein {ECO:0000313|EMBL:CCF83676.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" sour
putative membrane protein (DUF2306)
qh_7_scaffold_435_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10497..10835
DNA (339bp) protein (113aa)
lnt; apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] id=24657099 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Apolipoprotein N-acyltransferase {ECO:0000313|EMBL:ABC45776.1}; EC=2.3.1.- {ECO:0000313|EMBL:ABC45776.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodot
lnt; apolipoprotein N-acyltransferase
qh_7_scaffold_435_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10939..12039
DNA (1101bp) protein (367aa)
histidine kinase family protein id=24657098 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
histidine kinase family protein
Histidine kinase family {ECO:0000313|EMBL:ABC44439.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_435_17
unknown

Not on your lists

12163..13320
DNA (1158bp) protein (386aa)

This feature has no annotations

qh_7_scaffold_435_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13378..14115
DNA (738bp) protein (246aa)
Alginate biosynthesis regulatory protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S5X7_SALRD
alginate biosynthesis regulatory protein
Alginate biosynthesis regulatory protein {ECO:0000313|EMBL:ABC45322.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
qh_7_scaffold_435_19
unknown

Not on your lists

14758..14907
DNA (150bp) protein (50aa)

This feature has no annotations

qh_7_scaffold_435_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15035..16132
DNA (1098bp) protein (366aa)
ABC transporter, ATP-binding protein, proline/glycine betaine n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5X4_SALRM
glycine/betaine ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein, proline/glycine betaine {ECO:0000313|EMBL:CBH23429.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
qh_7_scaffold_435_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16190..17071
DNA (882bp) protein (294aa)
ABC-type proline/glycine betaine transport system, permease component n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5X5_SALRM
proline/glycine betaine ABC transporter permease
ABC-type proline/glycine betaine transport system, permease component {ECO:0000313|EMBL:CBH23430.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
qh_7_scaffold_435_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17128..18141
DNA (1014bp) protein (338aa)
glycine betaine ABC transporter glycine betaine-binding protein; K02002 glycine betaine/proline transport system substrate-binding protein id=24657283 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
glycine betaine ABC transporter glycine betaine-binding protein
Glycine betaine ABC transporter glycine betaine-binding protein {ECO:0000313|EMBL:CBH23431.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; S
qh_7_scaffold_435_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18498..19616
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5X8_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23433.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_435_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19830..20828
DNA (999bp) protein (333aa)
hypothetical protein id=24657286 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45387.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_435_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20964..22217)
DNA (1254bp) protein (418aa)
Transporter, major facilitator family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S5E9_SALRD
major facilitator superfamily transporter
Transporter, major facilitator family {ECO:0000313|EMBL:CBH23435.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sal
qh_7_scaffold_435_26
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

22784..25396
DNA (2613bp) protein (871aa)
TonB-denpendent receptor n=1 Tax=Salisaeta longa RepID=UPI0003B67CC1
TonB-dependent receptor Tax=CG_Ignavi_02
TonB-dependent receptor
qh_7_scaffold_435_27
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25580..26305
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000347B03C
Uncharacterized protein {ECO:0000313|EMBL:KGE87071.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylib
putative lipoprotein
Displaying 28 items

View Taxonomy