ggKbase home page

qh_7_scaffold_95

Search features with annotation key words

Displaying items 1-30 of 31 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_95_1
unknown

Not on your lists

2..184
DNA (183bp) protein (61aa)

This feature has no annotations

qh_7_scaffold_95_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(187..1569)
DNA (1383bp) protein (461aa)
Uncharacterized protein family (UPF0089) n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZM8_SALRD
hypothetical protein
Uncharacterized protein family (UPF0089) {ECO:0000313|EMBL:ABC46165.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
qh_7_scaffold_95_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1764..2939)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HC86_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25641.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_95_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3123..4049)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HC85_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25640.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_95_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4097..4873)
DNA (777bp) protein (259aa)
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein id=24658448 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ABC45736.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qh_7_scaffold_95_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5027..5779)
DNA (753bp) protein (251aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HC83_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC46044.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_95_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5976..7361
DNA (1386bp) protein (462aa)
radA; DNA repair protein RadA
radA; DNA repair protein RadA; K04485 DNA repair protein RadA/Sms id=24658446 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qh_7_scaffold_95_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7707..8306
DNA (600bp) protein (200aa)
rpoE; RNA polymerase sigma-E factor
rpoE; RNA polymerase sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=24658445 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
RNA polymerase sigma-E factor {ECO:0000313|EMBL:CBH25636.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_7_scaffold_95_9
unknown

Not on your lists

8373..8483
DNA (111bp) protein (37aa)

This feature has no annotations

qh_7_scaffold_95_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8967..9719
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZN5_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC46159.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_95_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9943..11211
DNA (1269bp) protein (423aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HC79_SALRM
amiB; N-acetylmuramoyl-L-alanine amidase
N-acetylmuramoyl-L-alanine amidase-like protein {ECO:0000313|EMBL:ABC45204.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" s
qh_7_scaffold_95_12
unknown

Not on your lists

11430..11996
DNA (567bp) protein (189aa)

This feature has no annotations

qh_7_scaffold_95_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12019..12417)
DNA (399bp) protein (133aa)
translation initiation inhibitor containig endoribonuclease L-PSP
endoribonuclease L-PSP id=24658440 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative translation initiation inhibitor containig endoribonuclease L-PSP {ECO:0000313|EMBL:CBH25632.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodoth
qh_7_scaffold_95_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12710..13861
DNA (1152bp) protein (384aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sed
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HC76_SALRM
trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1
qh_7_scaffold_95_15
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13854..14252
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B3A0D1
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ37084.1}; Flags: Precursor;; TaxID=937775 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoplanus
hypothetical protein
qh_7_scaffold_95_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14413..15852
DNA (1440bp) protein (480aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] id=24658438 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
hypothetical protein
qh_7_scaffold_95_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16026..16763
DNA (738bp) protein (246aa)
PhoP3 response regulator
PhoP3 response regulator id=24658437 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
PhoP3 response regulator {ECO:0000313|EMBL:ABC44000.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qh_7_scaffold_95_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16971..17681)
DNA (711bp) protein (237aa)
drrA; response regulator DrrA
drrA; response regulator DrrA id=24658436 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Response regulator DrrA {ECO:0000313|EMBL:CBH25628.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_95_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17939..19009
DNA (1071bp) protein (357aa)
frvX; endoglucanase; K01179 endoglucanase [EC:3.2.1.4] id=24658435 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
frvX; endoglucanase
Endoglucanase, putative {ECO:0000313|EMBL:CBH25627.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_95_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19567..20808
DNA (1242bp) protein (414aa)
serpin (serine proteinase inhibitor) id=24658289 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
serpin (serine proteinase inhibitor)
Serpin (Serine proteinase inhibitor) {ECO:0000313|EMBL:ABC45508.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qh_7_scaffold_95_21
unknown

Not on your lists

21149..22240
DNA (1092bp) protein (364aa)
Putative uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZLG8_9BACT Tax=ACD80
Putative uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZLG8_9BACT id=132476 bin=ACD80 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=ACD80 organism_group=SR1
qh_7_scaffold_95_22
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22118..23203)
DNA (1086bp) protein (362aa)
Metallophosphoesterase n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RAN3_METFO
Metallophosphoesterase {ECO:0000313|EMBL:EKF85349.1}; TaxID=1204725 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacter
phosphoesterase
qh_7_scaffold_95_23
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23282..24220)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-G06 RepID=UPI000369D70D
sulfotransferase
Sulfotransferase {ECO:0000313|EMBL:ABG04883.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter x
qh_7_scaffold_95_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24452..25810)
DNA (1359bp) protein (453aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:CBH25626.1}; EC=2.5.1.54 {ECO:0000313|EMBL:CBH25626.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HC71_SALRM
aroH; phospho-2-dehydro-3-deoxyheptonate aldolase
qh_7_scaffold_95_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25848..26762
DNA (915bp) protein (305aa)
drrA; response regulator DrrA
drrA; response regulator DrrA id=24658433 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Response regulator DrrA {ECO:0000313|EMBL:ABC44312.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_95_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26884..28368
DNA (1485bp) protein (495aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
sensor histidine kinase id=24658432 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sensor histidine kinase
qh_7_scaffold_95_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28750..30549
DNA (1800bp) protein (600aa)
hypothetical protein
hypothetical protein id=24658431 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45469.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_95_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30718..32223)
DNA (1506bp) protein (502aa)
carboxypeptidase; K01299 carboxypeptidase Taq [EC:3.4.17.19] id=24658430 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Carboxypeptidase {ECO:0000313|EMBL:ABC45252.1}; EC=3.4.17.19 {ECO:0000313|EMBL:ABC45252.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
carboxypeptidase
qh_7_scaffold_95_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

32381..33391
DNA (1011bp) protein (337aa)
hypothetical protein
hypothetical protein id=24658425 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45864.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_95_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

33590..34321
DNA (732bp) protein (244aa)
ABC transporter, ATP-binding protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZQ4_SALRD
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CBH25619.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
Displaying items 1-30 of 31 in total

View Taxonomy