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qh_7_scaffold_552

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_552_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2..115)
DNA (114bp) protein (38aa)
dut; deoxyuridine 5`-triphosphate nucleotidohydrolase; K01520 dUTP pyrophosphatase [EC:3.6.1.23] id=24657889 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
qh_7_scaffold_552_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(506..2383)
DNA (1878bp) protein (626aa)
Proton/peptide symporter family protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAP4_SALRM
proton/peptide symporter family protein
Proton/peptide symporter family protein {ECO:0000313|EMBL:CBH25099.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
qh_7_scaffold_552_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


2912..4549
DNA (1638bp) protein (546aa)
Aspartate--tRNA(Asp/Asn) ligase {ECO:0000255|HAMAP-Rule:MF_00044}; EC=6.1.1.23 {ECO:0000255|HAMAP-Rule:MF_00044};; Aspartyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00044}; Short=AspRS {ECO:0000255|
Aspartate--tRNA ligase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=SYD_SALRD
aspS; aspartyl-tRNA synthetase
qh_7_scaffold_552_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(4705..5712)
DNA (1008bp) protein (336aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD39_SALRM
pheS; phenylalanyl-tRNA synthetase subunit alpha
qh_7_scaffold_552_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(5855..6205)
DNA (351bp) protein (117aa)
50S ribosomal protein L20 n=2 Tax=Salinibacter ruber RepID=RL20_SALRD
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qh_7_scaffold_552_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(6346..6543)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=2 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=RL35_SALRD
hypothetical protein
50S ribosomal protein L35 {ECO:0000255|HAMAP-Rule:MF_00514}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_7_scaffold_552_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6750..7217)
DNA (468bp) protein (156aa)
Translation initiation factor IF-3 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD35_SALRM
infC; translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
qh_7_scaffold_552_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7512..9485)
DNA (1974bp) protein (658aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
Threonine--tRNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD34_SALRM
thrS; threonyl-tRNA synthetase
qh_7_scaffold_552_trna_1
unknown

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comp(9600..9673)
DNA (74bp)
transferRNA
qh_7_scaffold_552_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9950..10654
DNA (705bp) protein (235aa)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801, ECO:0000313|EMBL:CBH25938.1}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801, ECO:0000313|EMBL:CBH25938.1};; Deoxyinosine 3'endonuclease {ECO:0000256|HAM
Endonuclease V n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD33_SALRM
nfi; endonuclease V
qh_7_scaffold_552_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11414..11692)
DNA (279bp) protein (93aa)
AsnC family transcriptional regulator
AsnC family transcriptional regulator id=24658188 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:CBH25393.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
qh_7_scaffold_552_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11779..12066
DNA (288bp) protein (96aa)
GIY-YIG catalytic domain-containing protein
GIY-YIG catalytic domain-containing protein; K07461 putative endonuclease id=24658189 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
GIY-YIG catalytic domain, putative {ECO:0000313|EMBL:ABC44461.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
qh_7_scaffold_552_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12057..12422)
DNA (366bp) protein (122aa)
hypothetical protein
hypothetical protein id=24657230 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23376.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_552_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12479..12742)
DNA (264bp) protein (88aa)
hypothetical protein
hypothetical protein id=24657229 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23375.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_552_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13545..14360
DNA (816bp) protein (272aa)
ABC transporter (Substrate-binding protein), putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S5P7_SALRD
ABC transporter substrate-binding protein
ABC transporter (Substrate-binding protein), putative {ECO:0000313|EMBL:ABC44104.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacte
Displaying 15 items

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