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qh_7_scaffold_593

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_593_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..559
DNA (558bp) protein (186aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=797114 species="Archaea; Eur
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D6B7_9EURY
qh_7_scaffold_593_2
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(875..1252)
DNA (378bp) protein (126aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0A5S3_9EURY
hypothetical PIN domain protein
qh_7_scaffold_593_3
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1249..1482)
DNA (234bp) protein (78aa)
Conserved domain protein {ECO:0000313|EMBL:AEB67126.1}; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta concili
hypothetical protein
qh_7_scaffold_593_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1600..2436
DNA (837bp) protein (279aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4C8_9EURY
pseudouridylate synthase
qh_7_scaffold_593_5
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2562..3023)
DNA (462bp) protein (154aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=Q5UY31_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA15288.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
qh_7_scaffold_593_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3207..3359
DNA (153bp) protein (51aa)
50S ribosomal protein L39e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D296_9EURY
50S ribosomal protein L39e {ECO:0000256|HAMAP-Rule:MF_00629}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
50S ribosomal protein L39e
qh_7_scaffold_593_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3356..3634
DNA (279bp) protein (93aa)
50S ribosomal protein L31e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2F6_9EURY
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
ribosomal protein L31E
qh_7_scaffold_593_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3637..4302
DNA (666bp) protein (222aa)
Translation initiation factor 6 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D656_9EURY
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
translation initiation factor IF-6
qh_7_scaffold_593_9

Not on your lists

comp(4412..4774)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TTW7_9EURY
Malate/L-lactate dehydrogenase {ECO:0000313|EMBL:ESS12602.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
qh_7_scaffold_593_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


5245..5526
DNA (282bp) protein (94aa)
50S ribosomal protein L18Ae n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D464_9EURY
50S ribosomal protein L18Ae {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein L20e {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein LX {ECO:0000256|HAMAP-Rule:MF_00273}; TaxID=797114 sp
rplX; 50S ribosomal protein LX
qh_7_scaffold_593_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5523..5981
DNA (459bp) protein (153aa)
Prefoldin subunit alpha n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4L7_9EURY
Prefoldin subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; GimC subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
prefoldin subunit alpha
qh_7_scaffold_593_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5985..7094
DNA (1110bp) protein (370aa)
Signal recognition particle receptor FtsY n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D291_9EURY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobact
signal recognition particle-docking protein FtsY
qh_7_scaffold_593_13

Not on your lists

7242..8630
DNA (1389bp) protein (463aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=uncultured archaeon A07HR67 RepID=V4XNP0_9ARCH
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:ESS03663.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
twin-arginine translocation pathway signal protein
qh_7_scaffold_593_14
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8668..9603
DNA (936bp) protein (312aa)
binding-protein-dependent transport system inner membrane protein id=24653140 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:ERH13643.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;
binding-protein-dependent transport system inner membrane protein
qh_7_scaffold_593_15
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9600..10514
DNA (915bp) protein (305aa)
binding-protein-dependent transport system inner membrane protein id=24653139 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:ERH13642.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;
binding-protein-dependent transport system inner membrane protein
qh_7_scaffold_593_16

Not on your lists

10511..11683
DNA (1173bp) protein (391aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZMI3_9ARCH
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:ESS03665.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family
qh_7_scaffold_593_17
unknown

Not on your lists

comp(11843..12028)
DNA (186bp) protein (62aa)

This feature has no annotations

qh_7_scaffold_593_18
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12068..13138)
DNA (1071bp) protein (357aa)
NADH dehydrogenase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KBT8_9EURY
yjlD3; NADH dehydrogenase
NADH dehydrogenase {ECO:0000313|EMBL:EMA17619.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 33799
qh_7_scaffold_593_19
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13290..14168
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PMP6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA71287.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
hypothetical protein
qh_7_scaffold_593_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14239..14493)
DNA (255bp) protein (85aa)
Oxidoreductase domain protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D027_9EURY
Oxidoreductase domain protein {ECO:0000313|EMBL:ELZ28861.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
aspC; aspartyl-tRNA ligase
qh_7_scaffold_593_21
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14591..16057)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P088_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48880.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
Displaying 21 items

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