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QH_7_Halobacteriales_66_37

QH_7_Halobacteriales_67_40
In projects: QH_7  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: QH_7_UNK

Properties

Avg. coverage: 39.65 Longest contig: 35.57 Kbp Bin length: 1.71 Mbp GC content: 66.64 %
Contigs count: 269 Features count: 1926 rRNAs count: 0 tRNAs count: 19

Genome completeness

partial RP 32 / 55 MC: 4 BSCG 17 / 51 MC: 1 ASCG 28 / 38 MC: 3
Displaying items 51-100 of 269 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_7_scaffold_3333
Class: Halobacteria (66.67%)
3 3889 bp 64.26 45.20 91.18
qh_7_scaffold_4018
Order: Halobacteriales (50%)
6 4432 bp 66.54 42.96 91.18
qh_7_scaffold_3811
Class: Halobacteria (88.89%)
9 7980 bp 67.06 47.78 91.09
qh_7_scaffold_4797
Order: Natrialbales (60%)
5 4039 bp 67.74 39.61 91.06
qh_7_scaffold_1255
Order: Natrialbales (62.5%)
8 8789 bp 65.50 25.76 91.03
qh_7_scaffold_1896
Order: Halobacteriales (50%)
12 8094 bp 64.33 29.86 90.85
qh_7_scaffold_5030
Class: Halobacteria (80%)
5 5468 bp 69.70 37.89 90.80
qh_7_scaffold_3419
Order: Halobacteriales (50%)
4 3828 bp 63.43 27.46 90.75
qh_7_scaffold_1109
Order: Halobacteriales (50%)
18 13414 bp 70.02 52.04 90.67
qh_7_scaffold_5733
Order: Halobacteriales (57.14%)
7 4857 bp 67.37 35.85 90.55
qh_7_scaffold_1977
Class: Halobacteria (81.82%)
11 9548 bp 67.62 38.59 90.43
qh_7_scaffold_7164
Species: halophilic archaeon J07HX64 (50%)
6 3003 bp 68.70 31.90 90.41
qh_7_scaffold_775
Order: Halobacteriales (52.63%)
19 22595 bp 67.32 44.70 90.22
qh_7_scaffold_4757
Order: Halobacteriales (60%)
5 3066 bp 67.03 30.20 90.22
qh_7_scaffold_12594
Order: Halobacteriales (60%)
5 3985 bp 66.20 41.78 90.11
qh_7_scaffold_3179
Order: Halobacteriales (53.85%)
13 11544 bp 66.85 34.69 89.86
qh_7_scaffold_4725
Class: Halobacteria (66.67%)
3 3796 bp 64.36 42.54 89.86
qh_7_scaffold_3304
Order: Natrialbales (50%)
6 5619 bp 66.17 37.16 89.86
qh_7_scaffold_3970
Order: Natrialbales (50%)
4 4630 bp 68.55 40.52 89.68
qh_7_scaffold_4058
Order: Halobacteriales (60%)
5 5011 bp 66.11 42.15 89.56
qh_7_scaffold_741
Class: Halobacteria (53.85%)
13 13926 bp 68.26 47.41 89.51
qh_7_scaffold_6674
Class: Halobacteria (77.78%)
9 7398 bp 66.17 35.04 89.50
qh_7_scaffold_4411
Order: Halobacteriales (75%)
4 3217 bp 66.02 29.84 89.34
qh_7_scaffold_10027
Class: Halobacteria (71.43%)
7 4510 bp 65.85 38.91 89.27
qh_7_scaffold_2235
Order: Halobacteriales (66.67%)
6 5521 bp 65.08 42.48 89.17
qh_7_scaffold_640
Order: Halobacteriales (100%)
11 10802 bp 66.41 29.34 89.09
qh_7_scaffold_4472
Species: halophilic archaeon J07HX64 (50%)
4 6122 bp 63.31 32.05 89.09
qh_7_scaffold_562
Order: Halobacteriales (55.56%)
9 11488 bp 64.11 26.09 89.08
qh_7_scaffold_1614
Order: Halobacteriales (84.62%)
13 10419 bp 66.17 40.13 89.06
qh_7_scaffold_5288
Order: Halobacteriales (50%)
6 4602 bp 66.54 32.33 89.05
qh_7_scaffold_4118
Class: Halobacteria (66.67%)
3 3377 bp 69.74 32.69 88.93
qh_7_scaffold_3875
Order: Halobacteriales (66.67%)
3 3510 bp 70.20 42.68 88.89
qh_7_scaffold_2370
Order: Halobacteriales (57.14%)
7 4873 bp 67.17 30.37 88.84
qh_7_scaffold_960
Species: halophilic archaeon J07HX64 (62.5%)
8 10942 bp 70.06 34.47 88.83
qh_7_scaffold_2939
Order: Halobacteriales (90%)
10 10589 bp 70.52 42.57 88.76
qh_7_scaffold_1086
Order: Halobacteriales (54.55%)
11 10484 bp 66.93 36.75 88.71
qh_7_scaffold_2070
Species: halophilic archaeon J07HX64 (100%)
2 5295 bp 68.42 33.30 88.67
qh_7_scaffold_6177
Order: Halobacteriales (66.67%)
3 3577 bp 69.08 49.06 88.65
qh_7_scaffold_4243
Order: Halobacteriales (80%)
10 8734 bp 65.95 40.69 88.55
qh_7_scaffold_501
Order: Halobacteriales (55%)
20 18745 bp 67.48 40.84 88.54
qh_7_scaffold_7714
Order: Natrialbales (100%)
3 3789 bp 70.10 47.24 88.52
qh_7_scaffold_7885
Order: Halobacteriales (100%)
3 3057 bp 64.87 48.38 88.52
qh_7_scaffold_8301
Class: Halobacteria (66.67%)
3 3664 bp 62.83 40.15 88.43
qh_7_scaffold_6593
Order: Halobacteriales (50%)
8 4619 bp 68.76 37.49 88.33
qh_7_scaffold_1924
Order: Halobacteriales (81.82%)
11 10431 bp 66.45 39.59 88.29
qh_7_scaffold_2262
Order: Halobacteriales (57.14%)
7 5026 bp 66.73 37.05 88.22
qh_7_scaffold_2651
Class: Halobacteria (57.14%)
7 6132 bp 67.34 50.26 88.21
qh_7_scaffold_14169
Order: Halobacteriales (50%)
4 5081 bp 68.04 40.15 88.15
qh_7_scaffold_2551
Order: Halobacteriales (50%)
4 6058 bp 66.59 28.95 88.15
qh_7_scaffold_4288
Order: Halobacteriales (60%)
5 3286 bp 66.16 27.39 88.10
Displaying items 51-100 of 269 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.