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QH_7_Halobacteriales_66_37

QH_7_Halobacteriales_67_40
In projects: QH_7  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: QH_7_UNK

Properties

Avg. coverage: 39.65 Longest contig: 35.57 Kbp Bin length: 1.71 Mbp GC content: 66.64 %
Contigs count: 269 Features count: 1926 rRNAs count: 0 tRNAs count: 19

Genome completeness

partial RP 32 / 55 MC: 4 BSCG 17 / 51 MC: 1 ASCG 28 / 38 MC: 3
Displaying items 101-150 of 269 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_7_scaffold_423
Order: Halobacteriales (57.89%)
19 16046 bp 65.82 36.57 82.24
qh_7_scaffold_1086
Order: Halobacteriales (54.55%)
11 10484 bp 66.93 36.75 88.71
qh_7_scaffold_3238
Order: Halobacteriales (80%)
5 5120 bp 67.03 36.95 84.14
qh_7_scaffold_5992
Order: Halobacteriales (66.67%)
6 6564 bp 66.30 36.99 87.34
qh_7_scaffold_2262
Order: Halobacteriales (57.14%)
7 5026 bp 66.73 37.05 88.22
qh_7_scaffold_8456
Class: Halobacteria (80%)
5 3951 bp 64.79 37.16 67.20
qh_7_scaffold_3304
Order: Natrialbales (50%)
6 5619 bp 66.17 37.16 89.86
qh_7_scaffold_1528
Order: Halobacteriales (71.43%)
7 9801 bp 64.37 37.22 81.82
qh_7_scaffold_3735
Class: Halobacteria (50%)
4 5220 bp 64.90 37.36 97.36
qh_7_scaffold_5403
Order: Halobacteriales (54.55%)
11 7571 bp 65.82 37.46 78.71
qh_7_scaffold_6593
Order: Halobacteriales (50%)
8 4619 bp 68.76 37.49 88.33
qh_7_scaffold_13649
Order: Halobacteriales (60%)
5 3053 bp 64.99 37.57 77.63
qh_7_scaffold_6855
Order: Halobacteriales (75%)
8 5626 bp 68.86 37.71 91.40
qh_7_scaffold_6610
Class: Halobacteria (50%)
10 6755 bp 65.26 37.82 83.40
qh_7_scaffold_6167
Order: Halobacteriales (75%)
4 3916 bp 67.21 37.87 56.31
qh_7_scaffold_5030
Class: Halobacteria (80%)
5 5468 bp 69.70 37.89 90.80
qh_7_scaffold_7315
Class: Halobacteria (71.43%)
7 6483 bp 62.90 37.90 74.04
qh_7_scaffold_3472
Order: Halobacteriales (80%)
5 4135 bp 68.27 38.04 91.56
qh_7_scaffold_3928
Order: Natrialbales (50%)
4 3482 bp 62.69 38.05 92.71
qh_7_scaffold_2642
Order: Halobacteriales (66.67%)
9 7649 bp 65.15 38.24 83.42
qh_7_scaffold_7920
Class: Halobacteria (71.43%)
7 3739 bp 64.62 38.25 66.11
qh_7_scaffold_2821
Order: Halobacteriales (60%)
5 4363 bp 66.19 38.35 87.53
qh_7_scaffold_1653
Order: Halobacteriales (83.33%)
6 6824 bp 65.34 38.38 85.07
qh_7_scaffold_1977
Class: Halobacteria (81.82%)
11 9548 bp 67.62 38.59 90.43
qh_7_scaffold_2105
Order: Halobacteriales (83.33%)
6 6277 bp 65.13 38.67 76.61
qh_7_scaffold_2409
Order: Halobacteriales (50%)
8 6309 bp 67.68 38.69 74.70
qh_7_scaffold_3750
Order: Halobacteriales (66.67%)
6 4336 bp 65.15 38.77 83.72
qh_7_scaffold_2257
Order: Halobacteriales (62.5%)
8 7421 bp 65.18 38.78 76.69
qh_7_scaffold_10027
Class: Halobacteria (71.43%)
7 4510 bp 65.85 38.91 89.27
qh_7_scaffold_5662
Class: Halobacteria (85.71%)
7 6136 bp 66.98 38.95 77.54
qh_7_scaffold_7716
Class: Halobacteria (83.33%)
6 4653 bp 63.49 39.09 62.80
qh_7_scaffold_5884
Order: Natrialbales (50%)
6 7374 bp 68.02 39.10 85.92
qh_7_scaffold_14745
Order: Halobacteriales (60%)
5 3132 bp 64.88 39.11 71.55
qh_7_scaffold_10142
Order: Natrialbales (50%)
4 3554 bp 67.73 39.11 85.59
qh_7_scaffold_10119
Order: Halobacteriales (66.67%)
3 3750 bp 66.53 39.12 77.04
qh_7_scaffold_5842
Order: Halobacteriales (57.14%)
7 4440 bp 63.45 39.24 85.00
qh_7_scaffold_3073
Order: Halobacteriales (80%)
15 13313 bp 67.47 39.26 86.53
qh_7_scaffold_1924
Order: Halobacteriales (81.82%)
11 10431 bp 66.45 39.59 88.29
qh_7_scaffold_4797
Order: Natrialbales (60%)
5 4039 bp 67.74 39.61 91.06
qh_7_scaffold_9653
Order: Halobacteriales (80%)
5 4532 bp 67.74 39.67 91.81
qh_7_scaffold_3689
Class: Halobacteria (50%)
6 8145 bp 66.58 39.88 87.26
qh_7_scaffold_1807
Order: Halobacteriales (50%)
12 9498 bp 65.86 39.97 86.67
qh_7_scaffold_1614
Order: Halobacteriales (84.62%)
13 10419 bp 66.17 40.13 89.06
qh_7_scaffold_8301
Class: Halobacteria (66.67%)
3 3664 bp 62.83 40.15 88.43
qh_7_scaffold_14169
Order: Halobacteriales (50%)
4 5081 bp 68.04 40.15 88.15
qh_7_scaffold_9511
Order: Halobacteriales (60%)
5 3151 bp 65.98 40.18 72.45
qh_7_scaffold_3780
Order: Halobacteriales (66.67%)
6 3572 bp 67.19 40.20 91.97
qh_7_scaffold_8663
Order: Halobacteriales (100%)
4 3844 bp 63.01 40.32 70.16
qh_7_scaffold_1615
Class: Halobacteria (66.67%)
12 9462 bp 67.72 40.32 85.13
qh_7_scaffold_1502
Class: Halobacteria (85.71%)
14 13381 bp 66.71 40.37 81.05
Displaying items 101-150 of 269 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.