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qh_7_scaffold_213

Search features with annotation key words

Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_213_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..135
DNA (135bp) protein (45aa)
pccA; propionyl-CoA carboxylase biotin carboxylase component (EC:6.4.1.3)
Propionyl-CoA carboxylase biotin carboxylase component {ECO:0000313|EMBL:CCQ37440.1}; EC=6.4.1.3 {ECO:0000313|EMBL:CCQ37440.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteri
Propionyl-CoA carboxylase biotin carboxylase component n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XST0_NATM8
qh_7_scaffold_213_2
unknown

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175..387
DNA (213bp) protein (71aa)

This feature has no annotations

qh_7_scaffold_213_3
unknown

Not on your lists

comp(572..802)
DNA (231bp) protein (77aa)

This feature has no annotations

qh_7_scaffold_213_4
unknown

Not on your lists

comp(915..1691)
DNA (777bp) protein (259aa)

This feature has no annotations

qh_7_scaffold_213_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2025..3443
DNA (1419bp) protein (473aa)
Sensor box histidine kinase {ECO:0000313|EMBL:CAI49769.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CAI49769.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
Sensor box histidine kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQ29_NATPD
signal-transducing histidine kinase
qh_7_scaffold_213_6
unknown

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comp(3495..3698)
DNA (204bp) protein (68aa)

This feature has no annotations

qh_7_scaffold_213_7
unknown

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comp(3760..3957)
DNA (198bp) protein (66aa)

This feature has no annotations

qh_7_scaffold_213_8
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4309..4869
DNA (561bp) protein (187aa)
Transcriptional regulator TrmB n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NMI2_HALUD
transcriptional regulator TrmB
Transcriptional regulator TrmB {ECO:0000313|EMBL:ACV12621.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensi
qh_7_scaffold_213_9
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4912..5415
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XJB1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY61849.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
qh_7_scaffold_213_10
unknown

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5482..6228
DNA (747bp) protein (249aa)

This feature has no annotations

qh_7_scaffold_213_11
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6264..6503
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LMD2_HALWC
hypothetical protein
HTH domain protein {ECO:0000313|EMBL:CCC41252.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain DSM
qh_7_scaffold_213_12
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6500..6778
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LMD1_HALWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC41251.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
qh_7_scaffold_213_13
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6792..7046
DNA (255bp) protein (85aa)
UPF0395 family protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18G19_HALWD
hypothetical protein
UPF0395 family protein {ECO:0000313|EMBL:CAJ53084.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
qh_7_scaffold_213_trna_2
unknown

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comp(7437..7510)
DNA (74bp)
transferRNA
qh_7_scaffold_213_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7522..8043)
DNA (522bp) protein (174aa)
GNAT family acetyltransferase {ECO:0000313|EMBL:CAI50155.1}; EC=2.3.1.- {ECO:0000313|EMBL:CAI50155.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; N
GNAT family acetyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INZ7_NATPD
protein N-acetyltransferase-like protein
qh_7_scaffold_213_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8046..9230)
DNA (1185bp) protein (395aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000255|HAMAP-Rule:MF_00145}; EC=2.7.2.3 {ECO:0000255|HAMAP-Rule:MF_00145};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Phosphoglycerate kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PGK_NATPD
qh_7_scaffold_213_16

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9371..10513
DNA (1143bp) protein (381aa)
livH-4; branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein id=24637384 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:ESS11482.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
livH-4; branched-chain amino acid ABC transporter permease
qh_7_scaffold_213_17

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10510..11877
DNA (1368bp) protein (456aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y969_9ARCH
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:ESS11483.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
livM; high-affinity branched-chain amino acid transport protein
qh_7_scaffold_213_18
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11870..12769
DNA (900bp) protein (300aa)
ABC transporter n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PC81_9EURY
ABC transporter {ECO:0000313|EMBL:EMA67772.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560.;"
ABC transporter
qh_7_scaffold_213_19

Not on your lists

12766..13512
DNA (747bp) protein (249aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=uncultured archaeon A07HR60 RepID=V5A7B0_9ARCH
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ESS11485.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
ABC transporter
qh_7_scaffold_213_20

Not on your lists

comp(13703..14980)
DNA (1278bp) protein (426aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=uncultured archaeon A07HR60 RepID=V4YEK0_9ARCH
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:ESS11486.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;
branched-chain amino acid ABC transporter periplasmic protein
qh_7_scaffold_213_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15347..16147)
DNA (801bp) protein (267aa)
gch3; GTP cyclohydrolase III (EC:3.5.4.29)
GTP cyclohydrolase III {ECO:0000255|HAMAP-Rule:MF_00608}; EC=3.5.4.29 {ECO:0000255|HAMAP-Rule:MF_00608};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
GTP cyclohydrolase III n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=GCH3_NATPD
qh_7_scaffold_213_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16482..16784)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INY9_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50163.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qh_7_scaffold_213_23
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16908..17558
DNA (651bp) protein (217aa)
DNA binding protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N480_9EURY
DNA binding protein {ECO:0000313|EMBL:EMA51914.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13
DNA-binding protein
qh_7_scaffold_213_24
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17704..18153)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKA7_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ98398.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC BAA-
qh_7_scaffold_213_25
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18347..18847
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R3D9_HALMT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK18749.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain AT
qh_7_scaffold_213_26
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19092..20726
DNA (1635bp) protein (545aa)
Type II/IV secretion system ATPase protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQF2_NATPD
ATPase
Type II/IV secretion system ATPase protein {ECO:0000313|EMBL:CAI49644.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natrono
qh_7_scaffold_213_27
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20727..22817
DNA (2091bp) protein (697aa)
Type II/IV secretion system transmembrane protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQF1_NATPD
transmembrane protein (type II secretion system proteins TadC)
Type II/IV secretion system transmembrane protein {ECO:0000313|EMBL:CAI49645.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="
qh_7_scaffold_213_28
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22883..23533
DNA (651bp) protein (217aa)
S-adenosylmethionine-dependent methyltransferase 2 (EC:2.1.1.-)
Probable S-adenosylmethionine-dependent methyltransferase {ECO:0000313|EMBL:CAI49646.1}; EC=2.1.1.- {ECO:0000313|EMBL:CAI49646.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobact
Probable S-adenosylmethionine-dependent methyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQF0_NATPD
qh_7_scaffold_213_trna_1
unknown

Not on your lists

23590..23655
DNA (66bp)
transferRNA
Displaying 30 items

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