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qh_7_scaffold_2051

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_2051_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..627
DNA (627bp) protein (209aa)
rlmE; 23S rRNA (uridine-2'-O-) methyltransferase (EC:2.1.1.166)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTZ7_NATM8
qh_7_scaffold_2051_2
unknown

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comp(528..734)
DNA (207bp) protein (69aa)

This feature has no annotations

qh_7_scaffold_2051_3
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(880..1596)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5Y8_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ13794.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qh_7_scaffold_2051_4
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1589..1765)
DNA (177bp) protein (59aa)
Transcription regulator n=5 Tax=Halorubrum RepID=M0DFX0_9EURY
Transcription regulator {ECO:0000313|EMBL:ELZ54269.1}; TaxID=1227468 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 1011
hypothetical protein
qh_7_scaffold_2051_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1904..4135)
DNA (2232bp) protein (744aa)
Twin arginine translocation system subunit TatC n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISW9_NATPD
tatC_2; sec-independent protein translocase component TatC 2
Sec-independent protein translocase subunit TatC {ECO:0000313|EMBL:CAI48766.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="N
qh_7_scaffold_2051_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4266..5027
DNA (762bp) protein (254aa)
Twin arginine translocation system subunit TatC n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNN2_NATM8
tatC1; twin arginine translocation system subunit TatC
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" sourc
qh_7_scaffold_2051_7
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5105..6031
DNA (927bp) protein (309aa)
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}
lipA; lipoyl synthase (EC:2.8.1.-)
Probable lipoyl synthase n=1 Tax=halophilic archaeon J07HB67 RepID=U1PPD3_9EURY
qh_7_scaffold_2051_8
unknown

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6391..6600
DNA (210bp) protein (70aa)

This feature has no annotations

qh_7_scaffold_2051_9
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6737..7783
DNA (1047bp) protein (349aa)
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit {ECO:0000313|EMBL:ADB62459.1}; EC=1.2.4.1 {ECO:0000313|EMBL:ADB62459.1};; TaxID=543526 species="Archaea; Euryarchaeota; Halobac
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.1)
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RR63_HALTV
qh_7_scaffold_2051_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7785..8786
DNA (1002bp) protein (334aa)
oxdhB; 2-oxoacid dehydrogenase E1 component, beta subunit (EC:1.2.4.-)
2-oxo-3-methylvalerate dehydrogenase E1 component beta subunit {ECO:0000313|EMBL:CAI48370.1}; EC=1.2.4.4 {ECO:0000313|EMBL:CAI48370.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Hal
Probable branched-chain amino acid dehydrogenase E1 component beta subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU13_NATPD
qh_7_scaffold_2051_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9161..10345
DNA (1185bp) protein (395aa)
dsa; branched-chain alpha-keto acid dehydrogenase subunit E2 (EC:2.3.1.-)
Dihydrolipoamide S-acyltransferase {ECO:0000313|EMBL:CAI48369.1}; EC=2.3.1.- {ECO:0000313|EMBL:CAI48369.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriace
Dihydrolipoamide S-acyltransferase (Probable E2 component of branched-chain amino acid dehydrogenase) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU14_NATPD
qh_7_scaffold_2051_12
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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10605..10844
DNA (240bp) protein (80aa)
Membrane protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G8D3_9EURY
Membrane protein {ECO:0000313|EMBL:ELZ67094.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM 18310.;"
membrane protein
qh_7_scaffold_2051_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11013..11756
DNA (744bp) protein (248aa)
DNA polymerase sliding clamp n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PCNA_NATPD
pcn; DNA polymerase sliding clamp
DNA polymerase sliding clamp {ECO:0000255|HAMAP-Rule:MF_00317}; Proliferating cell nuclear antigen homolog {ECO:0000255|HAMAP-Rule:MF_00317}; Short=PCNA {ECO:0000255|HAMAP-Rule:MF_00317};; TaxID=34878
qh_7_scaffold_2051_14
unknown

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comp(11803..12222)
DNA (420bp) protein (140aa)

This feature has no annotations

qh_7_scaffold_2051_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12332..12805)
DNA (474bp) protein (158aa)
CHP00725 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU16_NATPD
hypothetical protein
TIGR00725 family protein {ECO:0000313|EMBL:CAI48367.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (s
qh_7_scaffold_2051_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12985..13113)
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITT0_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48453.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qh_7_scaffold_2051_17
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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13368..14558
DNA (1191bp) protein (397aa)
IS1341-type transposase (TCE32) n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WZM8_9EURY
IS1341-type transposase (TCE32) {ECO:0000313|EMBL:ELY54944.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyt
IS1341-type transposase (TCE32)
Displaying 17 items

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