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QH_7_Halobacteriales_64_12

In projects: QH_7  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: QH_7_UNK

Properties

Avg. coverage: 11.94 Longest contig: 24.03 Kbp Bin length: 1.61 Mbp GC content: 64.18 %
Contigs count: 261 Features count: 1825 rRNAs count: 0 tRNAs count: 23

Genome completeness

partial RP 31 / 55 MC: 2 BSCG 18 / 51 ASCG 24 / 38 MC: 2
Displaying items 1-50 of 261 in total
contig # features sequence size GC content (%) Cov Coding Density (%) notes
qh_7_scaffold_2824
Order: Halobacteriales (64.29%)
28 21860 bp 62.62 10.94 84.67
qh_7_scaffold_980
Order: Halobacteriales (69.23%)
26 17231 bp 64.31 11.10 83.94
qh_7_scaffold_1833
Order: Halobacteriales (60%)
25 21885 bp 64.55 12.17 83.62
qh_7_scaffold_1712
Order: Halobacteriales (62.5%)
24 24034 bp 61.17 18.80 74.46
qh_7_scaffold_946
Order: Halobacteriales (52.38%)
21 20008 bp 66.16 12.50 84.45
qh_7_scaffold_408
Class: Halobacteria (88.89%)
18 20530 bp 63.31 17.22 84.05
qh_7_scaffold_1232
Class: Halobacteria (83.33%)
18 18177 bp 63.97 9.88 90.46
qh_7_scaffold_2122
Class: Halobacteria (70.59%)
17 9571 bp 63.04 11.34 80.12
qh_7_scaffold_1503
Order: Halobacteriales (64.71%)
17 11408 bp 63.09 10.46 87.44
qh_7_scaffold_680
Order: Halobacteriales (50%)
16 16784 bp 57.61 12.99 83.60
qh_7_scaffold_1981
Order: Halobacteriales (81.25%)
16 10277 bp 63.37 13.69 88.07
qh_7_scaffold_1920
Class: Halobacteria (68.75%)
16 11656 bp 61.44 11.62 81.59
qh_7_scaffold_2310
Order: Halobacteriales (60%)
15 8864 bp 63.90 10.62 83.38
qh_7_scaffold_1641
Order: Halobacteriales (73.33%)
15 12474 bp 65.85 12.87 86.36
qh_7_scaffold_1525
Class: Halobacteria (86.67%)
15 13584 bp 62.38 11.20 87.01
qh_7_scaffold_3344
Class: Halobacteria (66.67%)
15 10338 bp 63.25 10.39 86.07
qh_7_scaffold_2485
Class: Halobacteria (71.43%)
14 10986 bp 57.93 11.31 71.82
qh_7_scaffold_1453
Order: Halobacteriales (71.43%)
14 10337 bp 63.01 12.65 75.37
qh_7_scaffold_1437
Order: Halobacteriales (64.29%)
14 11899 bp 62.91 10.34 74.30
qh_7_scaffold_3228
Order: Halobacteriales (64.29%)
14 9905 bp 62.37 10.16 83.75
qh_7_scaffold_1027
Class: Halobacteria (53.85%)
13 9669 bp 63.89 10.84 85.90
qh_7_scaffold_1534
Order: Halobacteriales (69.23%)
13 11135 bp 65.72 14.24 85.00
qh_7_scaffold_2611
Order: Halobacteriales (92.31%)
13 10547 bp 64.13 13.31 82.23
qh_7_scaffold_6478
Order: Halobacteriales (61.54%)
13 6180 bp 65.39 15.13 94.19
qh_7_scaffold_2654
Class: Halobacteria (84.62%)
13 9757 bp 65.12 11.46 87.63
qh_7_scaffold_1857
Class: Halobacteria (76.92%)
13 9969 bp 62.18 11.18 88.38
qh_7_scaffold_1489
Order: Halobacteriales (58.33%)
12 8220 bp 62.82 11.84 81.93
qh_7_scaffold_774
Order: Halobacteriales (66.67%)
12 9733 bp 63.04 11.74 84.49
qh_7_scaffold_1613
Order: Halobacteriales (50%)
12 12210 bp 60.83 9.93 83.07
qh_7_scaffold_1371
Order: Halobacteriales (72.73%)
11 9125 bp 62.93 10.37 85.12
qh_7_scaffold_7209
Order: Halobacteriales (90.91%)
11 5149 bp 64.13 14.86 100.27
qh_7_scaffold_840
Order: Halobacteriales (72.73%)
11 12023 bp 65.09 11.12 93.07
qh_7_scaffold_948
Order: Haloferacales (63.64%)
11 14109 bp 62.80 15.66 84.92
qh_7_scaffold_4031
Order: Halobacteriales (63.64%)
11 7177 bp 65.89 11.09 82.40
qh_7_scaffold_1607
Order: Halobacteriales (81.82%)
11 9885 bp 66.25 11.68 92.53
qh_7_scaffold_2342
Order: Halobacteriales (80%)
10 7749 bp 65.56 11.73 88.93
qh_7_scaffold_1487
Order: Halobacteriales (80%)
10 6505 bp 62.29 10.99 81.48
qh_7_scaffold_1098
Order: Halobacteriales (60%)
10 8632 bp 65.54 11.25 81.19
qh_7_scaffold_5401
Class: Halobacteria (50%)
10 6130 bp 60.86 10.07 73.90
qh_7_scaffold_8174
Order: Halobacteriales (60%)
10 7910 bp 65.74 10.87 95.08
qh_7_scaffold_2578
Order: Halobacteriales (70%)
10 7758 bp 65.11 11.81 81.48
qh_7_scaffold_1149
Order: Halobacteriales (50%)
10 7604 bp 66.37 13.30 88.45
qh_7_scaffold_2081
Order: Halobacteriales (60%)
10 10708 bp 65.11 12.11 84.69
qh_7_scaffold_3287
Order: Halobacteriales (70%)
10 7277 bp 64.26 9.87 88.06
qh_7_scaffold_8469
Class: Halobacteria (60%)
10 6110 bp 61.59 9.93 69.89
qh_7_scaffold_3202
Order: Halobacteriales (50%)
10 7726 bp 62.46 13.37 88.73
qh_7_scaffold_1022
Class: Halobacteria (70%)
10 10434 bp 64.76 11.31 81.11
qh_7_scaffold_3038
Order: Halobacteriales (60%)
10 9424 bp 63.35 19.57 83.88
qh_7_scaffold_4885
Class: Halobacteria (80%)
10 7493 bp 64.90 10.92 93.93
qh_7_scaffold_4504
Order: Halobacteriales (55.56%)
9 8301 bp 67.41 15.12 89.30
Displaying items 1-50 of 261 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.