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qh_7_scaffold_21

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_21_1
unknown

Not on your lists

comp(1..84)
DNA (84bp) protein (28aa)

This feature has no annotations

qh_7_scaffold_21_2

Not on your lists

254..625
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XW38_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS06428.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
qh_7_scaffold_21_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

700..1029
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D567_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29314.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
qh_7_scaffold_21_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1078..2598
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWE0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27495.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_7_scaffold_21_5
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2588..3028)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSN3_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA61682.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;
qh_7_scaffold_21_6
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3103..4131
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IWP1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP87607.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qh_7_scaffold_21_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4169..4738)
DNA (570bp) protein (190aa)
Receiver box response regulator n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSK8_NATM8
receiver box response regulator
Receiver box response regulator {ECO:0000313|EMBL:CCQ37360.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moola
qh_7_scaffold_21_8
unknown

Not on your lists

comp(4773..5339)
DNA (567bp) protein (189aa)

This feature has no annotations

qh_7_scaffold_21_trna_4
unknown

Not on your lists

comp(5112..5184)
DNA (73bp)
transferRNA
qh_7_scaffold_21_9
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5421..5648
DNA (228bp) protein (76aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025, ECO:0000313|EMBL:EMA32044.1}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025, ECO:0000313|EMBL:EMA32044.1};; TaxID=358396 species="
DNA-directed RNA polymerase subunit H n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LI08_9EURY
DNA-directed RNA polymerase, subunit H, RpoH/RPB5
qh_7_scaffold_21_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5649..7211
DNA (1563bp) protein (521aa)
rpoB2; DNA-directed RNA polymerase subunit beta'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:CAI48146.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI48146.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
DNA-directed RNA polymerase subunit B n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN4_NATPD
qh_7_scaffold_21_11
Halobacteriaceae archaeon YC89, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7213..9042
DNA (1830bp) protein (610aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1126241 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
rpoB1; DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
RNA polymerase subunit B n=1 Tax=Halorientalis regularis RepID=U3MZG6_9EURY
qh_7_scaffold_21_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9136..12132
DNA (2997bp) protein (999aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
DNA-directed RNA polymerase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYI6_HALMD
DNA-directed RNA polymerase subunit A'
qh_7_scaffold_21_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12125..14806
DNA (2682bp) protein (894aa)
DNA-directed RNA polymerase subunit A'' (Intein-containing) {ECO:0000313|EMBL:CAI48149.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI48149.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Haloba
rpoA2; DNA-directed RNA polymerase subunit A (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A'' (Subunit C) (Intein-containing) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN1_NATPD
qh_7_scaffold_21_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14848..15666
DNA (819bp) protein (273aa)
Transcription elongation factor NusA-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVX7_9EURY
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
transcription elongation factor NusA-like protein
qh_7_scaffold_21_15
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16258..16674
DNA (417bp) protein (139aa)
Nucleotidyltransferase protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XSI8_9EURY
Nucleotidyltransferase protein {ECO:0000313|EMBL:ELY63588.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10
nucleotidyltransferase domain protein
qh_7_scaffold_21_16

Not on your lists

16674..17114
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Halonotius sp. J07HN6 RepID=U1Q638_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESS08662.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
hypothetical protein
qh_7_scaffold_21_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


17178..17606
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGL6_9EURY
rps12; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.
qh_7_scaffold_21_18
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


17603..18220
DNA (618bp) protein (206aa)
30S ribosomal protein S7 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYI2_HALMD
30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480, ECO:0000256|RuleBase:RU003621}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.
qh_7_scaffold_21_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18341..18628
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0Q1_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ27734.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
qh_7_scaffold_21_20
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18659..19396
DNA (738bp) protein (246aa)
probable oxidoreductase (short-chain dehydrogenase family) (EC:1.1.1.-) id=24648839 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
probable oxidoreductase (short-chain dehydrogenase family) (EC:1.1.1.-)
Dehydrogenase {ECO:0000313|EMBL:ERH09971.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qh_7_scaffold_21_21
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19476..20708
DNA (1233bp) protein (411aa)
mRNA 3'-end processing factor/RNA-metabolising metallo-beta-lactamase n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YR83_9EURY
mRNA 3'-end processing factor/RNA-metabolising metallo-beta-lactamase {ECO:0000313|EMBL:ELY76186.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema
epf3; mRNA 3'-end processing factor/RNA-metabolising metallo-beta-lactamase
qh_7_scaffold_21_22
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20750..21319
DNA (570bp) protein (190aa)
HAD superfamily hydrolase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTU9_NATM8
HAD superfamily hydrolase
HAD superfamily hydrolase {ECO:0000313|EMBL:CCQ37871.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
qh_7_scaffold_21_23
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21316..22047)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0C6P5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ18946.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans D
hypothetical protein
qh_7_scaffold_21_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22125..22517
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFL6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43225.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_7_scaffold_21_25
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22605..22886)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLK2_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37868.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qh_7_scaffold_21_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22936..25299)
DNA (2364bp) protein (788aa)
DEAD/DEAH box helicase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4S1_9EURY
DEAD/DEAH box helicase {ECO:0000313|EMBL:ELZ29164.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
DEAD/DEAH box helicase domain protein
qh_7_scaffold_21_27
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25340..26776)
DNA (1437bp) protein (479aa)
MATE efflux family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXG1_9EURY
MATE efflux family protein {ECO:0000313|EMBL:EMA49993.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae D
multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps
qh_7_scaffold_21_28
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(26920..29580)
DNA (2661bp) protein (887aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049, ECO:0000313|EMBL:ELZ19529.1};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1230
Leucyl-tRNA ligase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CCD0_9EURY
leucyl-tRNA synthetase
qh_7_scaffold_21_29
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29827..30840)
DNA (1014bp) protein (338aa)
DNA primase large subunit PriL n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITU9_NATPD
priB; DNA primase large subunit
DNA primase large subunit PriL {ECO:0000256|HAMAP-Rule:MF_00701}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas ph
Displaying items 1-30 of 85 in total

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