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qh_7_scaffold_253

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_253_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..743
DNA (741bp) protein (247aa)
Ribonuclease R n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG13_9EURY
Ribonuclease R {ECO:0000313|EMBL:EMA43365.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.
ribonuclease R
qh_7_scaffold_253_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(795..992)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N630_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52145.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
qh_7_scaffold_253_3
unknown

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1450..1824
DNA (375bp) protein (125aa)

This feature has no annotations

qh_7_scaffold_253_trna_1
unknown

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comp(2123..2194)
DNA (72bp)
transferRNA
qh_7_scaffold_253_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2205..2822)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDE8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43368.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_7_scaffold_253_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2922..3230)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=2 Tax=Halococcus RepID=M0MF95_9EURY
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
rps10P; 30S ribosomal protein S10P
qh_7_scaffold_253_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3230..4495)
DNA (1266bp) protein (422aa)
elongation factor 1-alpha (EC:3.6.5.3)
Elongation factor 1-alpha n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG18_9EURY
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
qh_7_scaffold_253_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4630..5583)
DNA (954bp) protein (318aa)
Homoserine dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZQ0_9EURY
Homoserine dehydrogenase {ECO:0000313|EMBL:EMA49900.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
homoserine dehydrogenase
qh_7_scaffold_253_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5580..6110)
DNA (531bp) protein (177aa)
Allosteric regulator of homoserine dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWC5_9EURY
Allosteric regulator of homoserine dehydrogenase {ECO:0000313|EMBL:EMA49901.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
allosteric regulator of homoserine dehydrogenase
qh_7_scaffold_253_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6261..6479
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVX2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49902.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_7_scaffold_253_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6762..8912)
DNA (2151bp) protein (717aa)
Elongation factor 2 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX53_9EURY
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Haloba
translation elongation factor 2
qh_7_scaffold_253_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9168..9917
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG25_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43375.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_7_scaffold_253_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(10015..10635)
DNA (621bp) protein (207aa)
30S ribosomal protein S7 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZQ5_9EURY
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480, ECO:0000256|RuleBase:RU003621}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
30S ribosomal protein S7P
qh_7_scaffold_253_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(10635..11063)
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=2 Tax=Halococcus RepID=M0MC79_9EURY
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
rps12P; 30S ribosomal protein S12
qh_7_scaffold_253_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11433..11858)
DNA (426bp) protein (142aa)
Transcription elongation factor NusA-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVX7_9EURY
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
nusA; putative transcription elongation factor NusA protein
qh_7_scaffold_253_15
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11860..14523)
DNA (2664bp) protein (888aa)
DNA-directed RNA polymerase subunit A {ECO:0000313|EMBL:CCQ32814.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CCQ32814.1};; DNA-directed RNA polymerase subunit A'' protein {ECO:0000313|EMBL:ERJ07195.1}; EC=2.7.7.
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PP17_9EURY
qh_7_scaffold_253_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14516..16408)
DNA (1893bp) protein (631aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
rpoA1; DNA-directed RNA polymerase subunit A' (subunit A) (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG30_9EURY
Displaying 17 items

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