ggKbase home page

qh_7_scaffold_936

Search features with annotation key words

Displaying 21 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_936_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..126)
DNA (126bp) protein (42aa)
Mg2+ transporter n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBR4_9EURY
Mg2+ transporter {ECO:0000313|EMBL:EMA42788.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 535
mgtE2; MgtE family transport protein (probable substrate magnesium)
qh_7_scaffold_936_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(511..1914)
DNA (1404bp) protein (468aa)
Signal recognition particle 54 kDa protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEE7_9EURY
Signal recognition particle 54 kDa protein {ECO:0000256|HAMAP-Rule:MF_00306}; Short=SRP54 {ECO:0000256|HAMAP-Rule:MF_00306};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
signal recognition particle subunit ffh/srp54 (srp54)
qh_7_scaffold_936_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2182..2673)
DNA (492bp) protein (164aa)
Putative membrane-bound metal-dependent hydrolase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAL3_9EURY
Putative membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EMA42791.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
putative membrane-bound metal-dependent hydrolase
qh_7_scaffold_936_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2686..4014)
DNA (1329bp) protein (443aa)
Signal recognition particle receptor FtsY n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBI4_9EURY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobac
signal recognition particle-docking protein ftsy
qh_7_scaffold_936_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4024..4503)
DNA (480bp) protein (160aa)
Prefoldin subunit alpha n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBU4_9EURY
Prefoldin subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; GimC subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
pfdA; prefoldin alpha subunit
qh_7_scaffold_936_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4613..5278)
DNA (666bp) protein (222aa)
Translation initiation factor 6 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NF65_9EURY
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
translation initiation factor eIF-6
qh_7_scaffold_936_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5280..5558)
DNA (279bp) protein (93aa)
50S ribosomal protein L31e n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEF2_9EURY
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
ribosomal protein L31E
qh_7_scaffold_936_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5555..5707)
DNA (153bp) protein (51aa)
50S ribosomal protein L39e n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCN7_9EURY
50S ribosomal protein L39e {ECO:0000256|HAMAP-Rule:MF_00629}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
rpl39e; 50S ribosomal protein L39e
qh_7_scaffold_936_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6151..6702)
DNA (552bp) protein (184aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1227456 species="A
2'-5' RNA ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBT8_9EURY
2'-5' RNA ligase
qh_7_scaffold_936_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6906..7517
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NF59_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55330.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
TPR repeat-containing protein
qh_7_scaffold_936_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7498..7791
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEF6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42800.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_7_scaffold_936_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7800..8141)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAM4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42801.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_7_scaffold_936_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8278..8424
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAI6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42802.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_7_scaffold_936_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8483..9730
DNA (1248bp) protein (416aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloc
Cysteine desulfurase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBT4_9EURY
cysteine desulfurase, SufS subfamily
qh_7_scaffold_936_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9786..10205
DNA (420bp) protein (140aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAJ1_9EURY
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:EMA42807.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
SUF system FeS assembly protein, NifU family
qh_7_scaffold_936_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10469..11503)
DNA (1035bp) protein (345aa)
DNA repair and recombination protein RadA n=2 Tax=Halococcus saccharolyticus RepID=M0MBT6_9EURY
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
DNA repair and recombination protein RadA
qh_7_scaffold_936_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11623..12225)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDP8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42809.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_7_scaffold_936_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12862..13734)
DNA (873bp) protein (291aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Protease HtpX homolog n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCL9_9EURY
heat shock protein HtpX
qh_7_scaffold_936_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13847..14962
DNA (1116bp) protein (372aa)
NMD3 family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBG7_9EURY
NMD3 family protein {ECO:0000313|EMBL:EMA55317.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
nonsense mediated mRNA decay-like protein
qh_7_scaffold_936_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15087..15263)
DNA (177bp) protein (59aa)
Helicase c2 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBU1_9EURY
Helicase c2 {ECO:0000313|EMBL:EMA42813.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
helicase-like protein
qh_7_scaffold_936_21
unknown

Not on your lists

15566..15850
DNA (285bp) protein (95aa)

This feature has no annotations

Displaying 21 items

View Taxonomy