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qh_7_scaffold_2393

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_2393_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..295
DNA (294bp) protein (98aa)
LOR/SDH bifunctional protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4B8_9EURY
LOR/SDH bifunctional protein {ECO:0000313|EMBL:EMA51954.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandens
hypothetical protein
qh_7_scaffold_2393_2
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(846..2438)
DNA (1593bp) protein (531aa)
Sodium-solute symporter putative n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K6U3_9EURY
Sodium-solute symporter putative {ECO:0000313|EMBL:EMA15889.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiien
putP-2; sodium-solute symporter
qh_7_scaffold_2393_3
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2572..3297)
DNA (726bp) protein (242aa)
Putative transcription activator n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NU74_HALBP
putative transcription activator
Putative transcription activator {ECO:0000313|EMBL:ADQ68594.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum bo
qh_7_scaffold_2393_4
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3294..3956)
DNA (663bp) protein (221aa)
Transcriptional activator, TenA family protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F034_9EURY
Transcriptional activator, TenA family protein {ECO:0000313|EMBL:ELZ53325.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
tenA2; thiamine biosynthesis/salvage protein TenA
qh_7_scaffold_2393_5
unknown

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4171..4395
DNA (225bp) protein (75aa)

This feature has no annotations

qh_7_scaffold_2393_6
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4456..5775)
DNA (1320bp) protein (440aa)
ABC transporter n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MIX2_HALMO
ABC transporter {ECO:0000313|EMBL:EMA45647.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
btuD; ABC-type transport system ATP-binding protein (probable substrate cobalamin)
qh_7_scaffold_2393_7
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5772..6875)
DNA (1104bp) protein (368aa)
ABC-type vitamin B12 transporter, permease component BtuC n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PFG2_9EURY
btuC; ABC-type vitamin B12 transporter, permease component BtuC
ABC-type vitamin B12 transporter, permease component BtuC {ECO:0000313|EMBL:CCQ34377.1}; Cobalamin import system permease protein BtuC {ECO:0000313|EMBL:ERJ06063.1}; TaxID=1033806 species="Archaea; Eu
qh_7_scaffold_2393_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6938..8269
DNA (1332bp) protein (444aa)
Periplasmic binding protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZ26_9EURY
Periplasmic binding protein {ECO:0000313|EMBL:EMA38822.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis
periplasmic binding protein
qh_7_scaffold_2393_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8413..8691
DNA (279bp) protein (93aa)
Signal recognition particle 19 kDa protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MSZ1_9EURY
Signal recognition particle 19 kDa protein {ECO:0000256|HAMAP-Rule:MF_00305}; Short=SRP19 {ECO:0000256|HAMAP-Rule:MF_00305};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
signal recognition particle 19 kDa protein
qh_7_scaffold_2393_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8780..10153
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) PF6_NATPD">RepID=Q3IPF6_NATPD
hypothetical protein
DUF1119 family protein {ECO:0000313|EMBL:CAI49995.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (str
qh_7_scaffold_2393_11
unknown

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10185..10451
DNA (267bp) protein (89aa)

This feature has no annotations

qh_7_scaffold_2393_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10585..11418)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MA07_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41459.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qh_7_scaffold_2393_13
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11621..12691)
DNA (1071bp) protein (357aa)
ocd1; ornithine cyclodeaminase (EC:4.3.1.12)
Ornithine cyclodeaminase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRU4_9EURY
Ornithine cyclodeaminase {ECO:0000313|EMBL:EFW92713.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophi
qh_7_scaffold_2393_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13268..14653
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGT1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44937.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
glycosyl transferase
qh_7_scaffold_2393_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15099..16076
DNA (978bp) protein (326aa)
Transcription initiation factor IIB n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1P5_HALMD
transcription factor TFIIB cyclin-related protein
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
qh_7_scaffold_2393_16
unknown

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comp(15924..16235)
DNA (312bp) protein (104aa)

This feature has no annotations

qh_7_scaffold_2393_17
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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16296..16979
DNA (684bp) protein (228aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HA
3-dehydroquinate dehydratase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MFR6_HALMO
3-dehydroquinate dehydratase
Displaying 17 items

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