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qh_8_scaffold_1230

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_1230_1
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(156..725)
DNA (570bp) protein (190aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JYJ5_9BACT
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:ELR72719.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imteche
RNA polymerase ECF-type sigma factor
qh_8_scaffold_1230_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(824..1003)
DNA (180bp) protein (60aa)
Transposase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6H4_SALRM
transposase
Transposase {ECO:0000313|EMBL:CBH23629.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8
qh_8_scaffold_1230_3

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comp(1473..1916)
DNA (444bp) protein (148aa)
Marine sediment metagenome DNA, contig: S03H2_L03512 {ECO:0000313|EMBL:GAH42961.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Transposase id=4619782 bin=GWC2_Nitrospirae_57_13 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
qh_8_scaffold_1230_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2773..3417)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCT4_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25839.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_1230_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3519..5720)
DNA (2202bp) protein (734aa)
Thiol:disulfide interchange protein DsbD, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZ28_SALRD
Thiol:disulfide interchange protein DsbD, putative {ECO:0000313|EMBL:ABC44255.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;
thiol:disulfide interchange protein DsbD
qh_8_scaffold_1230_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(5864..6271)
DNA (408bp) protein (136aa)
protein-export membrane protein
protein-export membrane protein; K03075 preprotein translocase subunit SecG id=24658052 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44705.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_1230_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(6368..6925)
DNA (558bp) protein (186aa)
nudF; ADP-ribose pyrophosphatase; K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13] id=24658053 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:CBH25257.1}; EC=3.6.1.13 {ECO:0000313|EMBL:CBH25257.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
nudF; ADP-ribose pyrophosphatase
qh_8_scaffold_1230_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(7141..7641)
DNA (501bp) protein (167aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. I
Ribosomal RNA small subunit methyltransferase E n=2 Tax=Salinibacter ruber RepID=D5HB54_SALRM
hypothetical protein
Displaying 8 items

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