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qh_8_scaffold_1339

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_1339_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2..1021
DNA (1020bp) protein (340aa)
nrdB; ribonucleoside-diphosphate reductase; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] id=24657145 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:ABC45612.1}; EC=1.17.4.1 {ECO:0000313|EMBL:ABC45612.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidete
ribonucleoside-diphosphate reductase
qh_8_scaffold_1339_2
unknown

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1072..1347
DNA (276bp) protein (92aa)

This feature has no annotations

qh_8_scaffold_1339_3
unknown

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comp(2937..3173)
DNA (237bp) protein (79aa)

This feature has no annotations

qh_8_scaffold_1339_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3359..4177)
DNA (819bp) protein (273aa)
CRISPR-associated protein Cse3 n=1 Tax=Salisaeta longa RepID=UPI0003B3B70B
CRISPR-associated protein, Cse3 family
CRISPR-associated protein, Cse3 family {ECO:0000313|EMBL:ACY47387.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rh
qh_8_scaffold_1339_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4223..4867)
DNA (645bp) protein (215aa)
CRISPR-associated protein Cas5 n=1 Tax=Salisaeta longa RepID=UPI0003B77F91
CRISPR-associated protein Cas5 family
CRISPR-associated protein Cas5 family {ECO:0000313|EMBL:ACY47386.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rho
qh_8_scaffold_1339_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4867..6120)
DNA (1254bp) protein (418aa)
CRISPR-associated protein Cse4 n=1 Tax=Salisaeta longa RepID=UPI0003B49568
CRISPR-associated protein, Cse4 family
CRISPR-associated protein, Cse4 family {ECO:0000313|EMBL:ACY47385.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rh
qh_8_scaffold_1339_7
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6184..8268)
DNA (2085bp) protein (695aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B78802
CRISPR-associated protein, Cse1 family
CRISPR type I-E/ECOLI-associated protein CasA/Cse1 {ECO:0000313|EMBL:GAK34678.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
qh_8_scaffold_1339_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8452..8913
DNA (462bp) protein (154aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S160_SALRD
dut; deoxyuridine 5`-triphosphate nucleotidohydrolase
qh_8_scaffold_1339_9
unknown

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8952..9041
DNA (90bp) protein (30aa)

This feature has no annotations

qh_8_scaffold_1339_10
unknown

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9079..9993
DNA (915bp) protein (305aa)

This feature has no annotations

qh_8_scaffold_1339_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10295..10927)
DNA (633bp) protein (211aa)
Putative RNA methylase family UPF0020 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5G5_SALRM
RNA methylase family protein
Putative RNA methylase family UPF0020 {ECO:0000313|EMBL:CBH23270.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sal
qh_8_scaffold_1339_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11082..13178
DNA (2097bp) protein (699aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=761659 species="Bacteria; Bacteroidete
DNA primase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7S9_SALRM
dnaG; DNA primase
qh_8_scaffold_1339_13
unknown

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comp(13026..13601)
DNA (576bp) protein (192aa)

This feature has no annotations

qh_8_scaffold_1339_14
unknown

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13912..14406
DNA (495bp) protein (165aa)

This feature has no annotations

qh_8_scaffold_1339_15
R_WOR_2_41_12, WOR-2, Bacteria

Not on your lists

14762..15658
DNA (897bp) protein (299aa)
nuclease precursor (EC:3.1.31.1); K01174 micrococcal nuclease [EC:3.1.31.1] Tax=RIFCSPLOWO2_01_FULL_WOR_2_41_12_curated
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI0003603172
qh_8_scaffold_1339_16
unknown

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15856..16647
DNA (792bp) protein (264aa)

This feature has no annotations

qh_8_scaffold_1339_17
BJP_IG2102_Flavobacteriales_34_12, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16818..17204
DNA (387bp) protein (129aa)
Colicin V production protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SF93_RHOMR
colicin V production protein
Tax=BJP_IG2102_Flavobacteriales_34_12
Displaying 17 items

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