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qh_8_scaffold_113

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_113_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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540..956
DNA (417bp) protein (139aa)
Rrf2 family transcriptional regulator n=1 Tax=Salisaeta longa RepID=UPI0003B636AC
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBH23845.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qh_8_scaffold_113_2
unknown

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comp(1147..1458)
DNA (312bp) protein (104aa)

This feature has no annotations

qh_8_scaffold_113_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1557..2726
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5R3_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23368.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_113_4
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3287..6529
DNA (3243bp) protein (1081aa)
TonB-dependent receptor n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZMC9_9BACT
TonB-dependent receptor plug
TonB-dependent receptor {ECO:0000313|EMBL:EON75237.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacte
qh_8_scaffold_113_5
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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6754..8379
DNA (1626bp) protein (542aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037739B9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL25730.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobac
qh_8_scaffold_113_6
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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8385..9278
DNA (894bp) protein (298aa)
gluconolactonase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B57E37
SMP-30/gluconolaconase/LRE domain-containing protein Tax=RBG_16_Ignavibacteria_34_14_curated
SMP-30/gluconolaconase/LRE-like region-containing protein
qh_8_scaffold_113_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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9423..9929
DNA (507bp) protein (169aa)
Endoribonuclease L-PSP n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKV8_CHIPD
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ACU63868.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="
qh_8_scaffold_113_8
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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10036..11268
DNA (1233bp) protein (411aa)
Selenocysteine synthase (Seryl-tRNASer selenium transferase) n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4ANE8_MARSH
selenocysteine synthase
Selenocysteine synthase (Seryl-tRNASer selenium transferase) {ECO:0000313|EMBL:EAR02520.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribact
qh_8_scaffold_113_9
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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11386..12567
DNA (1182bp) protein (394aa)
Selenocysteine synthase (Seryl-tRNASer selenium transferase) n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4ANE8_MARSH
selenocysteine synthase
Selenocysteine synthase (Seryl-tRNASer selenium transferase) {ECO:0000313|EMBL:EAR02520.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribact
qh_8_scaffold_113_10
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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12776..14095
DNA (1320bp) protein (440aa)
Dihydroorotase n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4ANF2_MARSH
dihydroorotase
Dihydroorotase {ECO:0000313|EMBL:EAR02524.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter.;" source="Maribacter sp. (strain HTCC2170
qh_8_scaffold_113_11
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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14368..17790
DNA (3423bp) protein (1141aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KYH0_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE49411.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobact
qh_8_scaffold_113_12
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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17805..19562
DNA (1758bp) protein (586aa)
Cytochrome c class I n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IZR3_CYCMS
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:AEL25727.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain
qh_8_scaffold_113_13
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19684..20244
DNA (561bp) protein (187aa)
Endoribonuclease L-PSP n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IZQ8_CYCMS
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:AEL25722.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobact
qh_8_scaffold_113_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20281..20583
DNA (303bp) protein (101aa)
RNA polymerase subunit sigma-32 n=1 Tax=Salisaeta longa RepID=UPI0003B32777
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY48384.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qh_8_scaffold_113_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20643..22331
DNA (1689bp) protein (563aa)
sodium:solute symporter n=1 Tax=Salisaeta longa RepID=UPI0003B64615
Na+/solute symporter
Na+/solute symporter {ECO:0000313|EMBL:ACY48383.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus
qh_8_scaffold_113_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22599..23861
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJ95_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN73473.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qh_8_scaffold_113_17

Not on your lists

23954..25522
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R6M1_ISOPI
Marine sediment metagenome DNA, contig: S06H3_L02471 {ECO:0000313|EMBL:GAI17249.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
qh_8_scaffold_113_18
unknown

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comp(25351..25836)
DNA (486bp) protein (162aa)

This feature has no annotations

qh_8_scaffold_113_19
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26011..27759)
DNA (1749bp) protein (583aa)
sulfatase (EC:3.1.6.-)
Sulfatase, family S1-17 {ECO:0000313|EMBL:CAZ97290.1}; EC=3.1.6.- {ECO:0000313|EMBL:CAZ97290.1};; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zob
Sulfatase, family S1-17 n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L7B6_ZOBGA
qh_8_scaffold_113_20

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comp(27824..29230)
DNA (1407bp) protein (469aa)
transposase IS116/IS110/IS902 id=30791 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
Transposase IS116/IS110/IS902 {ECO:0000313|EMBL:EKD93539.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transposase
Displaying 20 items

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