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qh_8_scaffold_116

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_116_1
unknown

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comp(1..207)
DNA (207bp) protein (69aa)

This feature has no annotations

qh_8_scaffold_116_2
RLO_PLX_64_10, Bacteria

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1019..4060
DNA (3042bp) protein (1014aa)
ATP/ADP translocase-like protein n=1 Tax=Kordia algicida OT-1 RepID=A9E898_9FLAO
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
qh_8_scaffold_116_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4384..4920
DNA (537bp) protein (179aa)
Carbohydrate kinase, thermoresistant glucokinase family {ECO:0000313|EMBL:ACY47455.1}; EC=2.7.1.12 {ECO:0000313|EMBL:ACY47455.1};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II
Carbohydrate kinase, thermoresistant glucokinase family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MF05_RHOM4
thermoresistant glucokinase family carbohydrate kinase
qh_8_scaffold_116_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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4988..6001
DNA (1014bp) protein (338aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CX91_9BACT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EDY20889.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flav
short chain dehydrogenase
qh_8_scaffold_116_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6193..9483
DNA (3291bp) protein (1097aa)
recC; exodeoxyribonuclease V gamma subunit (EC:3.1.11.5)
Exodeoxyribonuclease V gamma subunit {ECO:0000313|EMBL:BAH40219.1}; EC=3.1.11.5 {ECO:0000313|EMBL:BAH40219.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; G
Exodeoxyribonuclease V gamma subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACJ2_GEMAT
qh_8_scaffold_116_6
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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9629..13336
DNA (3708bp) protein (1236aa)
RecBCD enzyme subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01485};; Exonuclease V subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; Helicase/nuclease RecBCD sub
recB; exodeoxyribonuclease V beta subunit (EC:3.1.11.5) rbh
Exodeoxyribonuclease V beta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACJ1_GEMAT
qh_8_scaffold_116_7
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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13450..15402
DNA (1953bp) protein (651aa)
recD; exonuclease V subunit alpha (EC:3.1.11.5)
Exodeoxyribonuclease V, alpha subunit n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BGU5_9ENTR
Tax=BJP_IG2102_Syntrophobacterales_60_12
qh_8_scaffold_116_trna_2
unknown

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comp(15607..15682)
DNA (76bp)
transferRNA
qh_8_scaffold_116_trna_1
unknown

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comp(15736..15808)
DNA (73bp)
transferRNA
qh_8_scaffold_116_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15869..16720)
DNA (852bp) protein (284aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:CBH25448.1}; EC=2.3.1.51 {ECO:0000313|EMBL:CBH25448.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incerta
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B74C35
plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase
qh_8_scaffold_116_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17102..18310
DNA (1209bp) protein (403aa)
riboflavin biosynthesis protein RibD n=1 Tax=Salisaeta longa RepID=UPI0003B30A65
ribD; riboflavin biosynthesis protein RibD
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769, ECO:0000313|EMBL:CBH25449.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
qh_8_scaffold_116_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18363..18998
DNA (636bp) protein (212aa)
ribC; riboflavin synthase subunit alpha; K00793 riboflavin synthase [EC:2.5.1.9] id=24658246 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:ABC44625.1}; EC=2.5.1.9 {ECO:0000313|EMBL:ABC44625.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhod
ribC; riboflavin synthase subunit alpha
qh_8_scaffold_116_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19125..21530
DNA (2406bp) protein (802aa)
excinuclease ABC subunit A n=1 Tax=Salisaeta longa RepID=UPI0003B73FD8
uvrA; excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qh_8_scaffold_116_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21493..21945
DNA (453bp) protein (151aa)
Excinuclease ABC subunit A n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5Z1_SALRM
uvrA; excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qh_8_scaffold_116_13
Aphanizomenon flos-aquae, Aphanizomenon, Nostocales, Cyanobacteria, Bacteria

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22002..23171
DNA (1170bp) protein (390aa)
Putative ATPase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C449_DESTA
Uncharacterized protein {ECO:0000313|EMBL:KHG41189.1}; TaxID=1532906 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Aphanizomenon.;" source="Aphanizomenon flos-aquae 2012/KM1/D3.;"
putative ATPase
qh_8_scaffold_116_14
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23168..23821
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B4006B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM24341.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile t
qh_8_scaffold_116_15
Prevotella sp. CAG:924, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23843..24001
DNA (159bp) protein (53aa)
Excision endonuclease subunit UvrA n=1 Tax=Prevotella sp. CAG:924 RepID=R5FSC6_9BACT
uvrA2; excinuclease ABC subunit A
Excision endonuclease subunit UvrA {ECO:0000313|EMBL:CCY03031.1}; TaxID=1262938 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" sourc
Displaying 17 items

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