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qh_8_scaffold_1041

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_1041_1
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2..187
DNA (186bp) protein (62aa)
Transposase n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZI16_9EURY
Transposase {ECO:0000313|EMBL:ELY86130.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
transposase
qh_8_scaffold_1041_2
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(284..688)
DNA (405bp) protein (135aa)
Transposase IS4 family protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LRB1_9EURY
Transposase IS4 family protein {ECO:0000313|EMBL:EMA36001.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.
ISH3-type transposase
qh_8_scaffold_1041_3
unknown

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757..948
DNA (192bp) protein (64aa)

This feature has no annotations

qh_8_scaffold_1041_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1108..1452)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MR32_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA47818.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_8_scaffold_1041_5

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1555..3315
DNA (1761bp) protein (587aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=uncultured archaeon A07HR67 RepID=V4XQ32_9ARCH
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:ESS04218.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
dppA; ABC-type dipeptide/oligopeptide/nickel transport system, substrate binding protein
qh_8_scaffold_1041_6

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3345..4301
DNA (957bp) protein (319aa)
ABC-type transporter, integral membrane subunit n=1 Tax=halophilic archaeon DL31 RepID=G2MNU6_9ARCH
ABC transporter
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEN07295.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qh_8_scaffold_1041_7

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4288..5256
DNA (969bp) protein (323aa)
ABC-type transporter, integral membrane subunit n=1 Tax=halophilic archaeon DL31 RepID=G2MNU5_9ARCH
ABC transporter
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEN07294.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qh_8_scaffold_1041_8

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5279..6604
DNA (1326bp) protein (442aa)
oligopeptide/dipeptide ABC transporter ATPase (EC:3.6.3.24)
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:AEN07293.1}; EC=3.6.3.24 {ECO:0000313|EMBL:AEN07293.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=halophilic archaeon DL31 RepID=G2MNE5_9ARCH
qh_8_scaffold_1041_9

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6779..7972
DNA (1194bp) protein (398aa)
oligopeptide/dipeptide ABC transporter ATPase (EC:3.6.3.24)
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:AEN07292.1}; EC=3.6.3.24 {ECO:0000313|EMBL:AEN07292.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=halophilic archaeon DL31 RepID=G2MNE4_9ARCH
qh_8_scaffold_1041_10
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8143..8427
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M8L3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41693.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
hypothetical protein
qh_8_scaffold_1041_11
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9242..9952
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NYI7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA62891.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 2199
qh_8_scaffold_1041_12
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(10136..10306)
DNA (171bp) protein (57aa)
insertion element protein (ISH2) n=1 Tax=Halomicrobium katesii RepID=UPI00036F8296
insertion element protein (ISH2)
Insertion element protein (ISH2) {ECO:0000313|EMBL:CCC41196.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsby
qh_8_scaffold_1041_13
unknown

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10411..10701
DNA (291bp) protein (97aa)

This feature has no annotations

qh_8_scaffold_1041_14

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11097..12230
DNA (1134bp) protein (378aa)
Alanine racemase domain protein n=1 Tax=halophilic archaeon DL31 RepID=G2MHV9_9ARCH
alanine racemase domain-containing protein
Alanine racemase domain protein {ECO:0000313|EMBL:AEN06925.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qh_8_scaffold_1041_15
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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12326..12673
DNA (348bp) protein (116aa)
N-acyl-D-glutamate deacylase (EC:3.5.1.82)
N-acyl-D-glutamate deacylase {ECO:0000313|EMBL:ADD07514.1}; EC=3.5.1.82 {ECO:0000313|EMBL:ADD07514.1};; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrial
N-acyl-D-glutamate deacylase n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3T1Q5_NATMM
qh_8_scaffold_1041_16
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12812..13306)
DNA (495bp) protein (165aa)
hypothetical protein id=24615695 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP86805.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qh_8_scaffold_1041_17
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13303..13773)
DNA (471bp) protein (157aa)
Nucleotidyltransferase domain protein id=24615696 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:ESP86806.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Can
nucleotidyltransferase domain protein
qh_8_scaffold_1041_18
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13912..14247
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W8H3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY45637.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 106
hypothetical protein
qh_8_scaffold_1041_19
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14228..14659
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WBF8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AKH97404.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum su
archaeal sugar-specific transcriptional regulator, TrmB family
qh_8_scaffold_1041_20
unknown

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14667..14930
DNA (264bp) protein (88aa)

This feature has no annotations

qh_8_scaffold_1041_21
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(14838..15101)
DNA (264bp) protein (88aa)
Type i restriction-modification system methyltransferase subunit n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JJX8_9EURY
Type i restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:EMA07985.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;"
type I restriction-modification system methyltransferase
qh_8_scaffold_1041_22
unknown

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comp(15216..15506)
DNA (291bp) protein (97aa)

This feature has no annotations

Displaying 22 items

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