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qh_8_scaffold_1848

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_1848_1
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1..705)
DNA (705bp) protein (235aa)
Transcription initiation factor IIB n=1 Tax=Natrinema gari JCM 14663 RepID=L9YQV3_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natria
transcription initiation factor TFB
qh_8_scaffold_1848_2
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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823..1404
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9YQ87_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY75851.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
qh_8_scaffold_1848_3
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1408..2169)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9YNN8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY75850.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
qh_8_scaffold_1848_4
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2279..3004
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9YNZ5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY75849.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
qh_8_scaffold_1848_5
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3109..3549)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0P960_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA65365.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;
hypothetical protein
qh_8_scaffold_1848_6
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3585..3974)
DNA (390bp) protein (130aa)
Nucleic acid binding OB-fold tRNA/helicase-type protein n=2 Tax=Halorhabdus tiamatea SARL4B RepID=S6CVG1_9EURY
nucleic acid binding OB-fold tRNA/helicase-type protein
OB-fold nucleic acid binding domain protein {ECO:0000313|EMBL:ERJ06493.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorh
qh_8_scaffold_1848_7
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4019..4381
DNA (363bp) protein (121aa)
Splicing coactivator subunit SRm300-like protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IJN0_9EURY
qh_8_scaffold_1848_8
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4483..4710)
DNA (228bp) protein (76aa)
DMT(Drug/metabolite transporter) superfamily permease n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IEY1_HALRX
DMT(drug/metabolite transporter) superfamily permease
DMT(Drug/metabolite transporter) superfamily permease {ECO:0000313|EMBL:AGB17299.1}; Flags: Precursor;; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloviv
qh_8_scaffold_1848_9
unknown

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comp(4720..4929)
DNA (210bp) protein (70aa)

This feature has no annotations

qh_8_scaffold_1848_10
unknown

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comp(5058..5411)
DNA (354bp) protein (118aa)

This feature has no annotations

qh_8_scaffold_1848_11
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5570..5947)
DNA (378bp) protein (126aa)
Water Stress and Hypersensitive response domain-containing protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IG27_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG04533.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
qh_8_scaffold_1848_12
unknown

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comp(5948..6082)
DNA (135bp) protein (45aa)

This feature has no annotations

qh_8_scaffold_1848_13
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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6433..8424
DNA (1992bp) protein (664aa)
alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase id=3242712 bin=GWF2_Planctomycetes_42_9 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
hypothetical protein Tax=GWF2_Planctomycetes_42_9_curated
qh_8_scaffold_1848_14
unknown

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comp(8619..8768)
DNA (150bp) protein (50aa)

This feature has no annotations

qh_8_scaffold_1848_15
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8765..9265)
DNA (501bp) protein (167aa)
DMT(Drug/metabolite transporter) superfamily permease n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BI24_9EURY
DMT(Drug/metabolite transporter) superfamily permease {ECO:0000313|EMBL:ELZ09309.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halo
DMT(drug/metabolite transporter) superfamily permease
qh_8_scaffold_1848_16
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9624..10154)
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IJI7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05546.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
qh_8_scaffold_1848_17
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10164..10349)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9ZGW2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY84403.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
transcriptional regulator
Displaying 17 items

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