ggKbase home page

qh_8_scaffold_1947

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_1947_1
unknown

Not on your lists

186..698
DNA (513bp) protein (171aa)

This feature has no annotations

qh_8_scaffold_1947_2
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2689..2952)
DNA (264bp) protein (88aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0F2_HALMD
CRISPR-associated protein Cas2
qh_8_scaffold_1947_3
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2954..3955)
DNA (1002bp) protein (334aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halofer
CRISPR-associated endonuclease Cas1 n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0ICT1_9EURY
cas1; CRISPR-associated Cas1 family protein
qh_8_scaffold_1947_4
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3958..4518)
DNA (561bp) protein (187aa)
CRISPR-associated RecB family exonuclease Cas4a n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YHB7_9EURY
CRISPR-associated protein, Cas4a
CRISPR-associated RecB family exonuclease Cas4a {ECO:0000313|EMBL:GAD53846.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum aci
qh_8_scaffold_1947_5
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4515..7307)
DNA (2793bp) protein (931aa)
cas3B; CRISPR-associated helicase Cas3 (EC:3.6.4.-)
CRISPR-associated nuclease/helicase Cas3 {ECO:0000313|EMBL:CCC40226.1}; EC=3.1.-.- {ECO:0000313|EMBL:CCC40226.1};; EC=3.6.4.- {ECO:0000313|EMBL:CCC40226.1};; TaxID=768065 species="Archaea; Euryarchaeo
CRISPR-associated helicase Cas3 n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LIH4_HALWC
qh_8_scaffold_1947_6
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7304..8152)
DNA (849bp) protein (283aa)
cas5B; CRISPR-associated endoribonuclease Cas5, Hmari subtype (EC:3.1.-.-)
CRISPR-associated endoribonuclease Cas5, Hmari subtype n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LIH3_HALWC
CRISPR-associated protein Cas5, Hmari subtype {ECO:0000313|EMBL:CCC40225.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloqua
qh_8_scaffold_1947_7
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8154..9182)
DNA (1029bp) protein (343aa)
CRISPR-associated protein Cas7 n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LIH2_HALWC
cas7; CRISPR-associated protein Cas7
CRISPR-associated protein Cas7 {ECO:0000313|EMBL:CCC40224.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi
qh_8_scaffold_1947_8
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9175..11259)
DNA (2085bp) protein (695aa)
CRISPR-associated protein Cas8b n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LIH1_HALWC
cas8b; CRISPR-associated protein Cas8b
CRISPR-associated protein Cas8b {ECO:0000313|EMBL:CCC40223.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi
qh_8_scaffold_1947_9
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11249..12070)
DNA (822bp) protein (274aa)
CRISPR-associated protein Cas6 n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M178_HALMO
CRISPR-associated protein Cas6 {ECO:0000313|EMBL:EMA39436.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae D
CRISPR-associated protein Cas6
qh_8_scaffold_1947_10
unknown

Not on your lists

comp(12331..12654)
DNA (324bp) protein (108aa)

This feature has no annotations

Displaying 10 items

View Taxonomy