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qh_8_scaffold_2532

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_2532_1

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comp(183..2684)
DNA (2502bp) protein (834aa)
Uncharacterized protein n=5 Tax=Legionella pneumophila RepID=Q5X8P9_LEGPA
Uncharacterized protein {ECO:0000313|EMBL:KKM70324.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
qh_8_scaffold_2532_2
R_RIF_OD1_09_50_13, RIF-OD1-9, Parcubacteria, Bacteria

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comp(2681..4084)
DNA (1404bp) protein (468aa)
type III restriction-modification system, Mod subunit n=3 Tax=Aminicenantes RepID=UPI0003B7B1B6
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_09_50_13_curated
hypothetical protein
qh_8_scaffold_2532_3
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(4084..4443)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-J15 RepID=UPI00035CD620
adenine specific DNA methylase Tax=RBG_16_Ignavibacteria_36_9_curated
adenine-specific DNA methylase
qh_8_scaffold_2532_4
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4581..4910
DNA (330bp) protein (110aa)
Type I restriction enzyme r protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VRQ3_9EURY
Type I restriction enzyme r protein {ECO:0000313|EMBL:ELY39844.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibe
qh_8_scaffold_2532_5

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comp(5059..6978)
DNA (1920bp) protein (640aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MQP7_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07946.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qh_8_scaffold_2532_6
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7068..8591)
DNA (1524bp) protein (508aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBL5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55367.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qh_8_scaffold_2532_7
unknown

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comp(8713..8916)
DNA (204bp) protein (68aa)

This feature has no annotations

qh_8_scaffold_2532_8
unknown

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comp(9222..9317)
DNA (96bp) protein (32aa)

This feature has no annotations

qh_8_scaffold_2532_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9432..10025
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TWF6_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJN57714.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
qh_8_scaffold_2532_10
unknown

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10252..10566
DNA (315bp) protein (105aa)

This feature has no annotations

qh_8_scaffold_2532_11
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10979..11407)
DNA (429bp) protein (143aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Halobacterium sp. DL1 RepID=G4IAS6_9EURY
homolog to endonuclease VapC
qh_8_scaffold_2532_12
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11407..11712)
DNA (306bp) protein (102aa)
Looped-hinge helix DNA binding domain, AbrB family n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JNC1_NATP1
looped-hinge helix DNA binding domain, AbrB family
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:AGB32313.1}; Transcriptional regulator {ECO:0000313|EMBL:ELY74264.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; N
qh_8_scaffold_2532_13
unknown

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11865..12530
DNA (666bp) protein (222aa)

This feature has no annotations

qh_8_scaffold_2532_14
unknown

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comp(12667..12861)
DNA (195bp) protein (65aa)

This feature has no annotations

qh_8_scaffold_2532_15
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13497..13916
DNA (420bp) protein (140aa)
DNA-directed RNA polymerase epsilon subunit n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L649_HALJP
DNA-directed RNA polymerase epsilon subunit {ECO:0000313|EMBL:EMA29057.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarc
Displaying 15 items

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