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qh_8_scaffold_2834

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_2834_1
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2..919)
DNA (918bp) protein (306aa)
Rhomboid family protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BXH3_9EURY
Rhomboid family protein {ECO:0000313|EMBL:ELZ15645.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans D
hypothetical protein
qh_8_scaffold_2834_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1040..1324
DNA (285bp) protein (95aa)
DNA-directed RNA polymerase subunit L {ECO:0000256|HAMAP-Rule:MF_00261}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00261};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
DNA-directed RNA polymerase subunit L n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH38_9EURY
DNA-directed RNA polymerase, subunit L
qh_8_scaffold_2834_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1778..3811)
DNA (2034bp) protein (678aa)
hypothetical protein; K09822 hypothetical protein id=24645802 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
UPF0753 protein J07HX64_01788 {ECO:0000256|HAMAP-Rule:MF_01871}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
UPF0753 family protein
qh_8_scaffold_2834_4

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comp(3766..4200)
DNA (435bp) protein (145aa)
Uncharacterized protein conserved in bacteria (DUF2309) n=1 Tax=uncultured archaeon A07HB70 RepID=V4XTG6_9ARCH
Uncharacterized protein conserved in bacteria (DUF2309) {ECO:0000313|EMBL:ESS05488.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
conserved hypothetical protein possibly coupled to NADH-ubiquinone oxidoreductase chain 5 homolog
qh_8_scaffold_2834_5
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4190..4474)
DNA (285bp) protein (95aa)
NADH-ubiquinone oxidoreductase, subunit 5 (EC:1.6.5.3) id=24641089 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
NADH-ubiquinone oxidoreductase, subunit 5 (EC:1.6.5.3)
Uncharacterized protein {ECO:0000313|EMBL:ERH13939.1}; Flags: Fragment;; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
qh_8_scaffold_2834_6
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4528..5625)
DNA (1098bp) protein (366aa)
ndhF; potential NADH-quinone oxidoreductase subunit 5 (EC:1.6.99.5)
Putative NADH-quinone oxidoreductase subunit 5 n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KKD6_9EURY
Putative NADH-quinone oxidoreductase subunit 5 {ECO:0000313|EMBL:EMA21591.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloa
qh_8_scaffold_2834_7
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6191..6760
DNA (570bp) protein (190aa)
guaD3; probable nucleoside deaminase (cytosine/guanine deaminase) (EC:3.5.4.-)
Cytosine deaminase-like metal-dependent hydrolase n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0DV24_9EURY
Cytosine deaminase-like metal-dependent hydrolase {ECO:0000313|EMBL:ELZ39356.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halor
qh_8_scaffold_2834_8
unknown

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6760..6921
DNA (162bp) protein (54aa)

This feature has no annotations

qh_8_scaffold_2834_9
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7172..8548)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E1Z3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ41806.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
qh_8_scaffold_2834_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8924..9130)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWE0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27495.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
qh_8_scaffold_2834_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9381..9659)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWE0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27495.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_8_scaffold_2834_12
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9946..11328
DNA (1383bp) protein (461aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
Histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Halogranum salarium B-1 RepID=J2ZEM5_9EURY
qh_8_scaffold_2834_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11668..11976)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D482_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ30255.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
qh_8_scaffold_2834_14
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(12101..12775)
DNA (675bp) protein (225aa)
Transposase, IS605 OrfB family, central region n=1 Tax=Natronococcus occultus SP4 RepID=L0JVF0_9EURY
transposase, IS605 OrfB family, central region
Transposase, IS605 OrfB family, central region {ECO:0000313|EMBL:AGB37007.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronoc
Displaying 14 items

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