ggKbase home page

qh_8_scaffold_349

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_349_1
unknown

Not on your lists

comp(3..65)
DNA (63bp) protein (21aa)

This feature has no annotations

qh_8_scaffold_349_2
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(114..689)
DNA (576bp) protein (192aa)
TrkA-C domain protein n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SSH1_PLABD
TrkA-C domain-containing protein
TrkA-C domain protein {ECO:0000313|EMBL:ADY59242.1}; Flags: Precursor;; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Ru
qh_8_scaffold_349_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1394..2050)
DNA (657bp) protein (219aa)
hypothetical protein
hypothetical protein id=24658707 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25892.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_349_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2128..2499)
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=Q2RYY0_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25891.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_349_5
unknown

Not on your lists

comp(2453..3382)
DNA (930bp) protein (310aa)

This feature has no annotations

qh_8_scaffold_349_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3379..3630)
DNA (252bp) protein (84aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HCY5_SALRM
isoamylase N-terminal domain-containing protein
Isoamylase N-terminal domain protein {ECO:0000313|EMBL:ABC44976.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qh_8_scaffold_349_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3675..4133)
DNA (459bp) protein (153aa)
hypothetical protein
hypothetical protein id=24658705 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25890.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_349_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4130..4744)
DNA (615bp) protein (205aa)
RNA polymerase sigma factor n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RYY2_SALRD
sigW; RNA polymerase sigma factor sigW
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_8_scaffold_349_9
Robiginitalea biformata, Robiginitalea, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4884..5924)
DNA (1041bp) protein (347aa)
Probable lipoprotein n=1 Tax=Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) RepID=A4CKS9_ROBBH
lipoprotein
Probable lipoprotein {ECO:0000313|EMBL:EAR15478.1}; TaxID=313596 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Robiginitalea.;" source="Robiginitalea biformata
qh_8_scaffold_349_10

Not on your lists

6070..6450
DNA (381bp) protein (127aa)
cli:Clim_2021 arsenical-resistance protein; K03325 arsenite transporter, ACR3 family id=718528 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Marine sediment metagenome DNA, contig: S12H4_L03527 {ECO:0000313|EMBL:GAI81315.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
arsenic resistance protein
qh_8_scaffold_349_11
unknown

Not on your lists

6457..6594
DNA (138bp) protein (46aa)

This feature has no annotations

qh_8_scaffold_349_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6733..7044
DNA (312bp) protein (104aa)
hypothetical protein
hypothetical protein id=24657342 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45030.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_349_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7034..7975
DNA (942bp) protein (314aa)
Metallo-beta-lactamase superfamily protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H638_SALRM
phnP; metallo-beta-lactamase superfamily protein
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:CBH23493.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
qh_8_scaffold_349_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8108..8752
DNA (645bp) protein (215aa)
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169,
3-dehydroquinate dehydratase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEE3_RHOMR
qh_8_scaffold_349_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8837..9337
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Rhodothermus marinus RepID=D0MCZ9_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47109.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qh_8_scaffold_349_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9590..10408
DNA (819bp) protein (273aa)
protein PASTA domain-containing protein
protein PASTA domain-containing protein id=24658634 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
PASTA domain protein {ECO:0000313|EMBL:ABC44475.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (
qh_8_scaffold_349_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10415..10930)
DNA (516bp) protein (172aa)
Bifunctional protein PyrR n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCS0_SALRM
pyrR; PyrR bifunctional protein
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_8_scaffold_349_18
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11304..12737
DNA (1434bp) protein (478aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B6958E
Uncharacterized protein {ECO:0000313|EMBL:AKF85512.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
histidine kinase
qh_8_scaffold_349_19
unknown

Not on your lists

12718..12822
DNA (105bp) protein (35aa)

This feature has no annotations

qh_8_scaffold_349_20
unknown

Not on your lists

12962..13714
DNA (753bp) protein (251aa)

This feature has no annotations

qh_8_scaffold_349_21
unknown

Not on your lists

13828..14823
DNA (996bp) protein (332aa)

This feature has no annotations

qh_8_scaffold_349_22

Not on your lists

14918..15178
DNA (261bp) protein (87aa)
LemA protein
LemA family protein; K03744 LemA protein id=5241272 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
LemA protein {ECO:0000313|EMBL:AJF60263.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Displaying 22 items

View Taxonomy