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qh_8_scaffold_4475

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_4475_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..849)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037B3336
Uncharacterized protein {ECO:0000313|EMBL:EMA48695.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qh_8_scaffold_4475_2
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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923..1357
DNA (435bp) protein (145aa)
Zinc finger SWIM domain protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J5M9_HALVA
Zinc finger SWIM domain protein {ECO:0000313|EMBL:EMA04276.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismor
qh_8_scaffold_4475_3
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1923..2858)
DNA (936bp) protein (312aa)
Transposase (ISH18) n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DQ10_9EURY
Transposase {ECO:0000313|EMBL:KKF40115.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
transposase (ISH18)
qh_8_scaffold_4475_4
unknown

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comp(3491..3607)
DNA (117bp) protein (39aa)

This feature has no annotations

qh_8_scaffold_4475_5
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4013..5779)
DNA (1767bp) protein (589aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI00037BF343
Antiporter (Na /H antiporter) {ECO:0000313|EMBL:EMA68596.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 1391
Na+/H+ antiporter
qh_8_scaffold_4475_6
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6015..6572
DNA (558bp) protein (186aa)
Transposase ISH11 n=2 Tax=Halococcus thailandensis JCM 13552 RepID=M0NF66_9EURY
Transposase ISH11 {ECO:0000313|EMBL:EMA56607.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 1355
transposase ISH11
qh_8_scaffold_4475_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6600..6914
DNA (315bp) protein (105aa)
Transposase ISH11 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2B2_9EURY
Transposase ISH11 {ECO:0000313|EMBL:EMA52067.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;
transposase ISH11
qh_8_scaffold_4475_8
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6923..8602)
DNA (1680bp) protein (560aa)
HTR-like protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LBV1_HALJP
multi-sensor signal transduction histidine kinase
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:ACV11071.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="H
qh_8_scaffold_4475_9
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8787..9341)
DNA (555bp) protein (185aa)
PAS domain S-box n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=L9ULU1_HALBP
PAS domain S-box {ECO:0000313|EMBL:ELY25641.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense (strai
PAS domain-containing protein
qh_8_scaffold_4475_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9617..10312
DNA (696bp) protein (232aa)
Na+/H+ antiporter n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBS1_9EURY
Na+/H+ antiporter {ECO:0000313|EMBL:EMA55316.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;
nhaC5; Na+/H+ antiporter
qh_8_scaffold_4475_11
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10725..11171
DNA (447bp) protein (149aa)
UpsA domain-containing protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPI5_9EURY
UpsA domain-containing protein {ECO:0000313|EMBL:EFW93468.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucih
hypothetical protein
Displaying 11 items

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